RNA id: XM_043253405.1


Basic Information

Item Value
RNA id XM_043253405.1
length 3446
RNA type mRNA
GC content 0.44
exon number 11
gene id tmem184ba
representative True

Chromosome Information

Item Value
chromosome id NC_056710.1
NCBI id CM032079.1
chromosome length 20499150
location 8541219 ~ 8549833 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome
species tiger barb
(Puntius tetrazona)

Sequence

GCGTGTTCTTGTTTCAGACTTCACAGCCGCTTTCCACTTTATCCCCGTTAAACTAATCCGCAAGAGATTTTATTGAACGCCAAGCGGAGTTGGGAGGGAAAGGAACTGCCTTTCAACGACAATCCAACTAAGATTGTATAAAAATCCTTCAGAACAGTCGCGAATACACCGTAAACTGTTCAAAGACGTGGTGAATAATTACATGGGAACAAATATAAAAGGACTGAGCGCAGATTTTCCAGCAGAGATCATCGGCGCTGGAATATAAACATGGATGACGGGCAGCAGCGATGGCTTTGAAGAATTAAGGCCGACTTGCTTGTCATTTGTTTTCCTTTGTGCACGGCGAATGGTTTTTAATCAGCGTTTATGTTAATGttgacCTGAAGTTCACTTTCTGTTTTGCCTCCATCCGATCAACAAGCGATGATTAGAACCAGCTTTTGAGACGTGACGTGCCGTTATCTGATCATTTCGGGGAGGAAGCTGTCGGGATGGCTCCCGGTTCTCTGGCCACGATGGCCCCCAACGGGCCCAACATCTCCTGGTTGCCAGAAGCTCCTCTGCTCACTCCAGAGAAGCCCATTTTTCTCATGACAACCACGGCCCAGGCAGTGTCAGGCTTCTTTGTGTGGACAGCACTTCTGCTCACCTGCCACCAGatcTACATGCATTTGCGTTACTACAGCTCTCCCAAGGAGCAGAGGCACATTGTGCGCATCCTTTTCATCGTACCCATCTACGCCTTTGACTCCTGGCTCAGCCTTCTCTTCTTTACCAACGACCAGTACTATGTGTACTTTGACACAGTCAGGGATTGCTATGAGGCATTTGTGATCTATAACTTCTTGAGCCTGTGTTATGAATACCTGGGAGGAGAGAGCGCTATCATGGCTGAGATCAGAGGAAAACCCATTGAGTCCAGCTGTATATACGGAACATGTTGTCTTTGGGGAAAGACCTACTCCATCGGCTTCCTTCGATTTTGCAAACAGGCTACTTTACAGTTCTGTGTGGTAAAACCCCTGATGGCCATGATTACAGTCATCCTGCAGGCTTTTGGGAAATACCGTGATGGGGATTTCAATGTCGCTAGTGGTTACTTGTACGTGACCATCATCTACAACATCTCCGTCAGCCTGTCCCTCTATGCTCTTTTCCTGTTCTACTTCGCCACCCGAGACCTCCTCAGCCCTTACAGGCCCATGCTCAAGTTCTTCATGGTAAAATCAGTCATCTTCCTCTCCTTCTGGCAAGGCATGCTGCTGGCCATCTTGGAGAAATGTGGTGCCATTCCTCAGATCAGCTCTCCTGAGGTTTCCGTCGGCGAAGGAACCGTTGCAGCTGGATACCAGAACTTCATCATTTGCATCGAGATGTTCTTTGCCGCCTTGGCTCTACGACACGCGTTTACCTACAAGGTGTACATGGACAAAAGACTAGATTCTCTTGGCCCTGTTCCTACATATGGACAGTACGGTCGTTGTGCCCCCATGAAGAGCATCTCCAGCAGCTTAAAGGAGACCATGAACCCAGGAGACATGGTCCAGGACGCCATCCACAATTTCTCCCCGGCCTACCAACAGTACACCCAGCAGTCCACCCTGGAGCAGGGGGTCACCGCGCCGCCCATATCCCGCAATCACAGCTGCGTGAGCGCCCGGGACAATGAGAAAACCCTGCTGCTTAGCTCCGATGATGAGTTCTAACTCGTTCCGCTTTTTTCCTGAGTAAAGGTACTCCGTAAGGGACCGTTTACCGCTGCGCTAGTGTAACGATGAGGTTAACATAGGAACAGATTATTAAAGGACCATCTTAAGCAAGTAGTTGCGTTCTAGTGCAGTAGAATCTAAAACGAAGCTGCTCATACTTGCTTAGTTGTCTTTAAACACAAATCTCGATGCGCTTTTGTCTGTTGCTGAGGTTTATACAGAGAGTTAAACGATACATTCATTTATACTTTTAGCCAAATTTTGAAAACCCGCATGGTCTGACACTTCGGCGATTTTTGAACAgatctatttttttatgcttgtaGTTTCACATAGGGGGTGTTCGGACATCCCAGTGTACTTAAAAAGAGCAGTGTACCCGTTCCTCTGGGAATGTTCCGTTTTTGATTTACAAGTTCAAGTGCACCTTTGCCTCTGTTTCAACAGTGTTTCTAGCTTCCCCAATGCTTTAAAGGGCGGGTATGGCTGCGGATGACAGAGCACAGTGGCGGGGCAACCAGATGTTCAAACGCACTGTTGTTTTGATGGATGGGGAGAGGTTGATAAGATTACAGATTAAGGCGTTCTGGAGTTTAAAGGCTGCAGTTGGAACGTTACTCGCCTGGTGCAGATTTGCACAAGCTTTCGTAAAAGTGTGACCGTTCCTGGGCCACCACAGGAAAAAACATCTATCTAGGTTAGCCGAGTGgtttaaaaaatagatttaggTTACGCCTTTTTAGTGCATGCTAGACGTTCACTCAGAAAGGACAAAGTACCCTCAGTTGTCGCCGTATTCCTGTTTGCTGGAAATGGAAAattgatataatttaaaaaaattttaaacgcacagttcacccaaaaactacaattctgttatcatttactcaccttcatggcATTCTAAAACCCTTTCTTTTGTTAAACACGGACTAAAAGttgaacttttcattttatgggCAAAAGCAGCGTATTGCTAAAGTTTTCCACTGAAGGTAAATCGTACCGTTTCAGTTTTGGGTGTGCTTTCCTTTTTATTAGGTATTGTATTGTTTCTAGATATCCCACTAGAGGGAGGCATATCTCTCAGTTTGCACTCTTTATCTTTATGGGACACGCCTGTTATCACTGATCCTTTGAGAGCCACACCAAAGTCTCTCCCGTTCTTCAGAAGCATCCGCCATTTGCGCTTTACCTCTTTAGATAGCACTAGGCTCTCGATGACCAAGCTTGAAGCTCGCGGTTGGGTTAGATAGCATCTTTGAAGTTACTCATTAACTGTCCTACGCTTTTATTGGTACAAAATAGAGGCCAGTATAAACACAAAGCAGCTGGAACCAAGTACGAGTATGTATGGTACCTGCTTATAGTTATGTTagtgtttttgcagtgtattattttataaggGGAggatttcttttaataatatagACGTTGTTGTAACTTGCACTAAgcagttttgtatatttaggaGCAATCCGAATATCCTAGAATATTTTGGAAAGCTATTTCTGTATGTTATTATTCAGAGAGTGGTTAAAGGTAACATAGgaagcgtttaaaaaaaaatatatatatatatattttgtcgaAACATTTTTGAAGTTACACTAAGACGTTTGTACtgtcatgttattttaaacggAGCATTATGTATTACTATGTCAAAGATTTTGCTTCTATTTTTTCCCTTGATGCTCTGGCCTAGGAAACAATAAAGGATTTTTGTCTGTA

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU128385 lncRNA downstream 3013 8535973 ~ 8538206 (-) True G86775
TU128374 lncRNA downstream 27974 8511635 ~ 8513245 (-) True LOC122355061
TU128139 lncRNA downstream 196610 8344336 ~ 8344609 (-) True G86608
TU128137 lncRNA downstream 201404 8339456 ~ 8339815 (-) True G86606
TU128132 lncRNA downstream 202519 8334407 ~ 8338700 (-) False cpped1
TU128416 lncRNA upstream 47561 8597394 ~ 8628972 (-) True G86798
TU128428 lncRNA upstream 73464 8623297 ~ 8626329 (-) True G86807
TU128431 lncRNA upstream 77261 8627094 ~ 8630207 (-) True G86809
TU128455 lncRNA upstream 125813 8675646 ~ 8747077 (-) True G86825
TU128456 lncRNA upstream 125813 8675646 ~ 8747077 (-) False G86825
XM_043253014.1 mRNA downstream 6578 8531984 ~ 8534641 (-) True tomm22
XM_043253925.1 mRNA downstream 9966 8528745 ~ 8531253 (-) True dmc1
XM_043253923.1 mRNA downstream 12745 8520500 ~ 8528474 (-) True gspt1
XM_043253924.1 mRNA downstream 21166 8517178 ~ 8520053 (-) True rsl1d1
XM_043254353.1 mRNA downstream 26036 8514713 ~ 8515183 (-) True LOC122355801
XM_043253205.1 mRNA upstream 551 8550384 ~ 8555651 (-) True csnk1e
XM_043253204.1 mRNA upstream 6442 8556275 ~ 8570074 (-) True tnrc6ba
XM_043253682.1 mRNA upstream 41908 8591741 ~ 8600914 (-) True sh3bp1
XM_043254384.1 mRNA upstream 52377 8602210 ~ 8606138 (-) True pdap1a
XM_043254453.1 mRNA upstream 56804 8606637 ~ 8611224 (-) True slc16a8
XR_006252259.1 other downstream 22110 8518980 ~ 8519109 (-) True LOC122355887
XR_006252260.1 other downstream 22854 8518235 ~ 8518365 (-) True LOC122355888
TU128131 other downstream 181239 8348162 ~ 8359980 (-) False cpped1
TU127575 other downstream 1152309 7388236 ~ 7388910 (-) True G86203
TU127438 other downstream 1437001 7103880 ~ 7104218 (-) True G86108
TU128398 other upstream 60719 8610552 ~ 8612445 (-) True G86783
XR_006252240.1 other upstream 133219 8683052 ~ 8687548 (-) False plbd1b
unassigned_transcript_1920 other upstream 137665 8687498 ~ 8687570 (-) True trnar-ccu_66
TU128530 other upstream 325784 8875617 ~ 8878112 (-) True LOC122355288
TU128628 other upstream 931726 9481559 ~ 9489290 (-) False ormdl3

Expression Profile