RNA id: XM_043253417.1


Basic Information

Item Value
RNA id XM_043253417.1
length 4715
RNA type mRNA
GC content 0.43
exon number 24
gene id fbxo11b
representative True

Chromosome Information

Item Value
chromosome id NC_056710.1
NCBI id CM032079.1
chromosome length 20499150
location 10918779 ~ 10931157 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome
species tiger barb
(Puntius tetrazona)

Sequence

agagagacacggaGCTCAGCACAGGGGGGAGCTGTccgaaaaaaaacacaccaacaaCACCCCGAATAAGAAAAACTGCCCCGGGTTGGTGTCCTTTTTCGGCTTAGACGGGCGATTAGACTTGTTTCAGACCAGAAATTTGTGTAAATGCTAAGAACATCAGGATAAGGTTCGAGGGAAGCGTATTTTTTCTTGGTAAAGTCACCTCGCCAAATGAACTCCGTCAGAGCGAGCAGCAGGAGACCCAGGCGACTGTCGAGGCCGCGCCCGGTGCAGCCGGAAAGAAACAACGCAGAAAGAGacaaaaaaagagagaagagtcACAGCTGATCAGATAAAGATTTAATAAGCAGGTACCAAATGTGCTGTAGGGAAGGACAGACTGTAAGGCTCTCAGGTGATCAGTACACCAGGTATTGACAGATGAGGACATCCCTGCAGATATGGTTGCAGAAGAATCTGGTCCAGGAGCTCAAAACAGTCCATACCAACTCCGTAGAAAGTCCCTGTTGCCTAAAAGAACCGTGTGCCCCACGAAAAACAGTATGGAGGGAGCCTCCACTTCAGCCACAGAAAATTTTGGTCACAGAGCTAAACGTGCAAGAGTGTCGGGAAAATCCCAGGACTTGCCAGCTGCTCCTGCGGAGCAGTATCTCCAAGAGAAGCTTCCGGATGAAGTCGTTCTGAAGATATTCTCCTACCTGCTGGAGCAGGATCTGTGCCAGGCTGCCTGCGTATGCAAGCGATTCAGTGAGCTTGCAAATGACCCAATTCTCTGGAAGAGACTATACATGGAGGTGTTTGAGTACACGCGGCCCATGATGCATCCAGAGCCGGGGAAGTTCTATCAGATCAACCCAGAAGAGTATGAGCAACCAAACCCGTGGAAAGAGAGCTTTCAGCAGTTGTATAAAGGAGCACATGTAAAGCCTGGTTTTGCAGAACACTTCTATAGTAATCCAGCCAGATACAAAGGCAGAGAGAATATGTTGTATTATGACACCATTGAGGATGCATTGGGAGGGGTGCAGGAGGCCCATTTTGATGGCCTGATATTCGTGCATTCTGGCATTTACACAGATGAATGGATCTACATTGAATCCCCCATCACAATGATTGGTGCAGCCTCAGGGAAGGTAGCTGACAAGGTTGTCATCGAAAACACTAGAGATTCAACGTTTGTGTTTATGGAGGGATCTGAAGATGCATATGTGGGCTACATGACCATCAGGTTCAACCCTGATGATAAGTCAGCGCAGCACCATAATGCTCACCACTGTTTGGAGATCACGGTTAACTGCAGCCCCAACATTGACCACTGTGTAATCCGCAGTACCTGCACAGTGGGATCAGCGGTGTGTGTAAGTGGTCAGGGTGCCGGACCTACCATCAAACACTGCAATATCAGCGATTGTGAAAATGTTGGACTCTACATCACTGATCATGCACAGGGTATTTATGAAGATAACGAAATCTCAAACAATGCGCTTGCGGGTATCTGGGTAAAAAATCATGGCAATCCCATCATCAGACGTAATCACATCCACCATGGCAGAGATGTAGGAGTGTTTACCTTTGACCATGGCATGGGCTACTTTGAGAGCTGTAACATCCATAGAAACAGGATTGCAGGATTTGAGGTGAAAGCATACGCAAACCCAACCGTAGTACGCTGTGAGATCCACCACGGCCAAACGGGGGGCATCTACGTACacgagaaaggcagaggccagtTCATAGAAAACAAAATCTATGCTAATAACTTTGCTGGTGTGTGGATCACCTCTAACAGTGACCCGACTATAAGGGGAAATGCCATTTTCAATGGAAACCAAGGAGGTGTTTACATATTCGGTGATGGGAGGGGCCTCATTGAGGGAAATGATATTTATGGAAATGCCCTGGCTGGCATTCAGATCAGAACGAACAGCTGTCCTATAGTAAGGCACAACAAGATCCATGACGGGCAGCATGGAGGAATCTATGTGCATGAAAAGGGCCAGGGTGTAATAGAGGAAAATGAGGTGTACAGCAACACTCTGGCAGGAGTGTGGGTGACCACAGGAAGCACACCGGTACTCAGGAGGAACAGGATACACAGTGgaaaacagGTTGGGGTGTATTTTTATGACAACGGACATGGAGTACTGGAAGATAATGATATCTACAATCACATGTACTCTGGAGTCCAGATCAGaactggAAGCAATCcaaaaataagaagaaacaaaatTTGGGGTGGACAAAACGGAGGTATCCTTGTTTACAATTCTGGGCTGGGTTTCATCGAGGACAATGAGATCTTTGATAATGCCATGGCGGGGGTGTGGATTAAGACGGACAGCAACCCCACGCTGCGCAGGAATAAAATCCATGATGGACGGGATGGGGGTATTTGCATATTCAACGGCGGGAGGGGGTTGTTGGAAGAGAATGATATCTTCAGGAATGCACAGGCTGGTGTTCTCATCAGCACAAATAGCCACCCGGTGCTGCGGAAGAACCGGATATTTGATGGCTTTGCTGCAGGCATTGAAATCACAAACCATGCCACGGCAACTCTGGAAGGCAATCAAATATTCAACAACAGATTTGGAGGCTTATTTCTAGCCTCTGGTGTCAACGTTACAATGAAAGACAACAAAATCATGAACAATCAGGATGCCATAGAAAAGGCGGTGAGCAGAGGTCAGTGCCTGTACAAGATTTCCAGTTACACCAGCTACCCCATGCACGATTTCTACAGGTGTCACACCTGTAACACAACAGACCGGAATGCAATTTGTGTGAATTGTATTAAGAAGTGCCACCAAGGGCATGATGTGGAGTTTATACGGCATGATAGGTTTTTTTGTGACTGTGGTGCGGGTACATTGTCCAATCCTTGCACATTGGCTGGAGAGCCGACCCATGATACGGACACTCTGTATGACTCTGCACCTCCCATAGAATCCAACACATTACAGCACAACTGAGAATTCAGCTCAACCTCCATCACAGCACCCTGGCCTTTATCGTACCTGCCTACAAATCCAGAGCGCCTGCCATTTCTGGGCCAGAGAGACCTGGTGTGCGAAGTGTGTGTGGATAACTAAAACTGTCAGACTtttgaattaatcattttaagagAAACTATCCTCGGAAAGGTGAAACGCAGAACTCCAAAGCCGCGTAAAGCTGCCTCAGTACTGGGTGCAGACTCTCTTGTATATTGCTAACTGAGAAGATGTTTTAAACAAGGAGTTCTCTTCACTTCTGTTTGGGAGCGTGATGGATGATTTGGAAGAGTGAAATATTGTGAAGCAATATGTTGACTCAGGATTCTGGAGATTATGGAGGTGGGTGCCACAGTGGTGTTGAGTTTGGGAGGGGAGTAGACTTTCTTGGGTCCTTCCAATCGCAAAGTCCGATGCTGTGCGCCCTGCCCTGTGCAACTTCAGTGCTATGTGGAGATTCAAGACGAGTTCTGCTGCAGTTTTTGTACAGATCTGACCATGACCCGAGCCACTAGGAGCTACAGATTGCGGTTTCTCGGATTAGAGGCAGAGCCATTCCATTATGGCTTCCGGCGACTGTTTTTTGACAGCAGATGTGCTGAAATATATGtatgatataaaaaattaacaaaacaaacaaacaaaaaaaaaaaaaaaacaatgtgattagcacttgcttttttttaatatgttaatatgtgtTTCTGATCtacaaatatgattttaatgctttctcatgtagttttgtattttcaggcaaaaaaaaaaatcttactgtatttgaatgtcttttattttattatatattattattattattattattattattaatatttttgttagcaCACATTAGGCTTGCTGTAATCATACTCCTGTCTCAGCATATAAGTTCTTTCTATGAAAGAGGAATAACAAAGAAAAGATCAGTAAACGAACACTAAATTGTCctccagcatttttttttttttttaatgaggtgACTTTTAAGTTAACTTCTTTTTATGCGAGCGATTGAAGTGTGGAATTTACGGTTGTGCAGGTTCAGAAATGTTTGCATCACCTTTGTTGCTGCCATAattagaaaagtttttttttttttttttttttttttctgcctgttGTATTTAtctctttcatttttaacttcCCGTTCTAAATATTTGGAGCTTTAATCTCCAGACggtttgaagtgttaaaaaaggGCCCAAAGAATTCTATAACATGTTTTATAACCGTTCATCTTACacagaatgtaaagaaaaaattctattaaaaacaatcccagagcattttcattcagttaatATTTTGGTCGTAGAATCCTGAAAATGCCTCTTGACTTTTCAAATCatctttattgcatttttttgggCCCATGGCCTGACTTGTGCCTGTTTTAAGTATGATAGTGATTTTGAAAAGCCTTGCTGGAGTTGGTTATATCGGAGGCCTCTGGCCTCTTTGAAGCTGAGACAAGTATCTCTACAGCCCCATCGTCTTTTTTGCCCCTCAAACTCCATCTATGTGTAATGTGGTGACTGTGGCTTCTCATGCAGCCTGAATTTTATGCATGTGTACCATAACATCTAGACTTAATATATTGTGAAGTCTTCAATAACCATTATGTAGATGCTAGTATGAATTTAAAAAGGGTTTAATTTCCTAGAAAAGAACAGAAACTggtcatttttaagaaaataaactttattagATCAA

Function

GO: NA

KEGG:

id description
K10297 FBXO11; F-box protein 11

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU129351 lncRNA downstream 22632 10895841 ~ 10896147 (-) True G87406
XR_006252171.1 lncRNA downstream 24062 10868848 ~ 10894717 (-) True LOC122355137
TU129314 lncRNA downstream 54183 10816561 ~ 10864596 (-) False G87376
TU129316 lncRNA downstream 54183 10817958 ~ 10864596 (-) True G87376
TU129332 lncRNA downstream 114041 10793063 ~ 10804738 (-) True G87388
TU129382 lncRNA upstream 73851 11005008 ~ 11006938 (-) False cript
TU129386 lncRNA upstream 140092 11071249 ~ 11071765 (-) True G87429
TU129411 lncRNA upstream 177739 11108896 ~ 11165039 (-) True G87449
TU129412 lncRNA upstream 193290 11124447 ~ 11126279 (-) True G87450
TU129359 lncRNA upstream 327860 11259017 ~ 11298534 (-) True G87409
XM_043253419.1 mRNA downstream 2895 10900253 ~ 10915884 (-) False foxn2b
XM_043253418.1 mRNA downstream 2896 10900253 ~ 10915883 (-) True foxn2b
XM_043253136.1 mRNA downstream 305277 10610648 ~ 10613502 (-) True chac2
XM_043254356.1 mRNA downstream 774050 10138438 ~ 10144729 (-) True LOC122355804
XM_043253390.1 mRNA downstream 1113269 9788025 ~ 9805510 (-) True LOC122355287
XM_043254470.1 mRNA upstream 705 10931862 ~ 10938013 (-) True msh2
XM_043253850.1 mRNA upstream 53885 10985042 ~ 10996581 (-) False socs5a
XM_043253848.1 mRNA upstream 53885 10985042 ~ 10995907 (-) False socs5a
XM_043253847.1 mRNA upstream 53885 10985042 ~ 10995906 (-) True socs5a
XM_043253701.1 mRNA upstream 73849 11005006 ~ 11006954 (-) True cript
XR_006252200.1 other downstream 1429467 9484946 ~ 9489312 (-) False ormdl3
XR_006252199.1 other downstream 1429467 9484946 ~ 9489312 (-) False ormdl3
TU128628 other downstream 1429489 9481559 ~ 9489290 (-) False ormdl3
TU128627 other downstream 1429489 9481630 ~ 9489290 (-) False ormdl3
TU128530 other downstream 2040667 8875617 ~ 8878112 (-) True LOC122355288
TU129388 other upstream 111731 11042888 ~ 11045882 (-) True LOC122355648
TU129464 other upstream 390266 11321423 ~ 11322603 (-) True G87489
TU129586 other upstream 901722 11832879 ~ 11835612 (-) True G87569
TU129639 other upstream 1018114 11949271 ~ 11951155 (-) False G87608
TU129915 other upstream 1718226 12649383 ~ 12675472 (-) False prr15lb

Expression Profile