Gene
RNA
| Item | Value |
|---|---|
| RNA id | XM_043253670.1 |
| length | 5445 |
| RNA type | mRNA |
| GC content | 0.40 |
| exon number | 9 |
| gene id | ptenb |
| representative | False |
| Item | Value |
|---|---|
| chromosome id | NC_056710.1 |
| NCBI id | CM032079.1 |
| chromosome length | 20499150 |
| location | 7720387 ~ 7735245 (-) |
| genome version | ASM1883169v1_2021_tiger_barb_Genome |
| species | tiger barb (Puntius tetrazona) |
| id | name | namespace |
|---|---|---|
| GO:0030097 | hemopoiesis | biological_process |
| GO:0046855 | inositol phosphate dephosphorylation | biological_process |
| GO:0046856 | phosphatidylinositol dephosphorylation | biological_process |
| GO:0006470 | protein dephosphorylation | biological_process |
| GO:0001568 | blood vessel development | biological_process |
| GO:0031647 | regulation of protein stability | biological_process |
| GO:0008285 | negative regulation of cell population proliferation | biological_process |
| GO:0051895 | negative regulation of focal adhesion assembly | biological_process |
| GO:0051898 | negative regulation of protein kinase B signaling | biological_process |
| GO:0060027 | convergent extension involved in gastrulation | biological_process |
| GO:0030336 | negative regulation of cell migration | biological_process |
| GO:0031174 | lifelong otolith mineralization | biological_process |
| GO:0008138 | protein tyrosine/serine/threonine phosphatase activity | molecular_function |
| GO:0030165 | PDZ domain binding | molecular_function |
| GO:0051800 | phosphatidylinositol-3,4-bisphosphate 3-phosphatase activity | molecular_function |
| GO:0042577 | lipid phosphatase activity | molecular_function |
| GO:0016314 | phosphatidylinositol-3,4,5-trisphosphate 3-phosphatase activity | molecular_function |
| GO:0004725 | protein tyrosine phosphatase activity | molecular_function |
| GO:0000287 | magnesium ion binding | molecular_function |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU127784 | lncRNA | downstream | 12193 | 7707860 ~ 7708194 (-) | True | G86357 |
| TU127783 | lncRNA | downstream | 14904 | 7705221 ~ 7705483 (-) | True | G86356 |
| TU127781 | lncRNA | downstream | 21373 | 7698665 ~ 7699014 (-) | True | G86354 |
| TU127756 | lncRNA | downstream | 84243 | 7634638 ~ 7636144 (-) | True | G86333 |
| TU127757 | lncRNA | downstream | 85831 | 7631396 ~ 7634556 (-) | True | G86334 |
| TU127809 | lncRNA | upstream | 111236 | 7846481 ~ 7846832 (-) | True | G86375 |
| TU127862 | lncRNA | upstream | 152721 | 7887966 ~ 7888246 (-) | True | G86412 |
| TU127863 | lncRNA | upstream | 155058 | 7890303 ~ 7891221 (-) | True | G86413 |
| TU127922 | lncRNA | upstream | 319523 | 8054768 ~ 8055031 (-) | True | G86458 |
| TU128016 | lncRNA | upstream | 375948 | 8111193 ~ 8112713 (-) | True | G86516 |
| XM_043253709.1 | mRNA | downstream | 57656 | 7651748 ~ 7662731 (-) | True | lipf |
| XM_043253708.1 | mRNA | downstream | 58009 | 7651748 ~ 7662378 (-) | False | lipf |
| XM_043253706.1 | mRNA | downstream | 73596 | 7636843 ~ 7646791 (-) | True | stambpl1 |
| XM_043253707.1 | mRNA | downstream | 73610 | 7636843 ~ 7646777 (-) | False | stambpl1 |
| XM_043253976.1 | mRNA | downstream | 106020 | 7612135 ~ 7614367 (-) | True | ifit9 |
| XM_043253457.1 | mRNA | upstream | 12347 | 7747592 ~ 7754731 (-) | True | papss2b |
| XM_043253460.1 | mRNA | upstream | 19612 | 7754857 ~ 7760517 (-) | False | minpp1b |
| XM_043253458.1 | mRNA | upstream | 19612 | 7754857 ~ 7758644 (-) | True | minpp1b |
| XM_043254280.1 | mRNA | upstream | 43051 | 7778296 ~ 7789396 (-) | False | usp42 |
| XM_043254278.1 | mRNA | upstream | 43051 | 7778296 ~ 7789396 (-) | True | usp42 |
| TU127575 | other | downstream | 331477 | 7388236 ~ 7388910 (-) | True | G86203 |
| TU127438 | other | downstream | 616169 | 7103880 ~ 7104218 (-) | True | G86108 |
| TU127372 | other | downstream | 1049140 | 6670319 ~ 6671247 (-) | True | G86049 |
| XR_006252215.1 | other | downstream | 1646955 | 6064298 ~ 6073432 (-) | False | LOC122355418 |
| XR_006252216.1 | other | downstream | 1666034 | 6051723 ~ 6054353 (-) | False | LOC122355418 |
| TU128131 | other | upstream | 612917 | 8348162 ~ 8359980 (-) | False | cpped1 |
| XR_006252260.1 | other | upstream | 782990 | 8518235 ~ 8518365 (-) | True | LOC122355888 |
| XR_006252259.1 | other | upstream | 783735 | 8518980 ~ 8519109 (-) | True | LOC122355887 |
| TU128398 | other | upstream | 875307 | 8610552 ~ 8612445 (-) | True | G86783 |
| XR_006252240.1 | other | upstream | 947807 | 8683052 ~ 8687548 (-) | False | plbd1b |
