RNA id: XM_043253671.1


Basic Information

Item Value
RNA id XM_043253671.1
length 1757
RNA type mRNA
GC content 0.37
exon number 7
gene id sult1st6
representative True

Chromosome Information

Item Value
chromosome id NC_056710.1
NCBI id CM032079.1
chromosome length 20499150
location 5736592 ~ 5746530 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome
species tiger barb
(Puntius tetrazona)

Sequence

AGGAAGTCGTTACAGTACATGTCTAAAGCAGAGTAGATCGAAGTGAAGTGACACAGTTAGAGTCTAAGAGAGAACACTCAAAATCACAAGGATACTGATAATAAGAATATTGAAACTAGTAGCAAGAAATTTTGGAAAGCAAACTGAGCGTAATAATACTTCAGCAAGGTTAAACAAATATCTAACTTCAATATTGAAATGGTAAAAGTttgatattttatgatatttaaaaaaaaaacagaaacatataCTAAAAAAGTGCTAAAAGGAAAGATCTGGAACAGAGTAAAACTGGTGGAAAATCTAAGAAAGTAGGACTGAAAAGAATAAGAGGATATCCCAGAGGACCTTTGTGTGGTGATGGAAAAGGAACAGCTGAGCTATGAAGAAGCCATTCGGAGGGCAGGTGAAGCTATTCGTCGTTTTCCTCTAATAGATGTCCAGGGTGTCCCTCTTATGAGCACCATTGCTGAAAACTGGAAATCAGTTGCTGAATTCTGTCCTGACCCATCAGACCTACTCATCTCTACTTACCCCAAAGCAGGCACAACCTGGGCTCAAGAGATAGTAGATCTTCTGCAGCACAATGGAGATGCCGAGGTGTGCAAGAGAGCGCCAACAGCTGTTCGTATTCCATTTCTGGAGATTTTTGCTCCTCCACCCATACCTTCAGGGCTTGACTTGCTTAGACAGATGAAACCACCGAGAGTCATCAAAACTCATCTGCCCATCCAGCTAGTGCCTAAAGGATTCTGGGAAAATAAATGCAAGGTCATTTATATTGCCCGGAATGCTAAGGATAACCTTGTAAGCTACTTCCACTTTGATCGCATGAATCTTACCCAGCCAGAGCCAGGACCTTGGGATGGATACATTCACAAGTTCATGAAGGGACAATTAGGTTGGGGCTCTTGGTATGACCATGTAAAAGGTTACTGGAAGGAACGCAAGGAAAGGAATATTCTCTACATACTCTTTGAGGACATGAAGGAGaatCCTTTAAGAGAGATTAAGAAGATCATGCACTATTTGGACTTGTCCGTTTCTGAAGATATAATAGAGAGGATTGCGCAGCTGACTTCCTTCCACGTCATGAAAGACAATCCAATGGCTAACTACTCCTACATTCCTAAAGCTGTGTTTGATCAGTCCATTTCTACCTTCATGAGAAAAgGAGAGGTTGGTGACTGGATTAACCATTTCACCCCAGCTCAAGCCCAGATGTTTGATGAAGACTACGCAAACCAGATGAAAGATGTGAACATTCCATTCCGCTATAGCATTTGATCTCTAAATAATACACCTGATCTTACACAGCGCAAAATTATAtatgagatttttttgttagaattaatttaattatttctataaaagcTTCGAGATATATGCTTATTAATTATAGATTGATTATTAACAGctaacagcaagacatttaaCAGATGGAACctaaaatcaaataaagacaataatcGGTGAGCGAATGAGAACTGCTAAATGCTATTATCATGCAGCTGAACCAAaaccacaaaagaaaacagaattcatgaaattaataaaaaaaaaaatatattaattttctttctttctttttcattttaacatacaAATGGACTAGCATCTATAGTTTTAAAGATAATAATCAGTAACCATAGCTAATACGAACTGAGGCACAATAGCATAAAAGTTTCTGTAAAACTGCTTTGTATTGTAATGTGTATTGCAATGTCCACTATGCAAATAAATTTGACTCAACTTGA

Function

GO:

id name namespace
GO:0004304 estrone sulfotransferase activity molecular_function

KEGG:

id description
K01025 SULT1; sulfotransferase

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU127129 lncRNA downstream 5502 5727304 ~ 5731090 (-) True G85868
TU127056 lncRNA downstream 310081 5423084 ~ 5426511 (-) False lsm5
TU127055 lncRNA downstream 310465 5423084 ~ 5426127 (-) False lsm5
TU126767 lncRNA downstream 1283316 4452755 ~ 4453276 (-) True G85572
TU126762 lncRNA downstream 1323230 4412624 ~ 4413362 (-) False LOC122355055
TU127155 lncRNA upstream 64127 5810657 ~ 5814446 (-) True G85889
TU127161 lncRNA upstream 73819 5820349 ~ 5821178 (-) True G85891
TU127162 lncRNA upstream 90842 5837372 ~ 5837674 (-) True G85892
TU127163 lncRNA upstream 92029 5838559 ~ 5838957 (-) True G85893
TU127200 lncRNA upstream 211048 5957578 ~ 5957779 (-) True G85922
XM_043254045.1 mRNA downstream 3304 5703313 ~ 5733288 (-) True avl9
XM_043254041.1 mRNA downstream 46203 5685526 ~ 5690389 (-) True buc2l
XM_043254040.1 mRNA downstream 46204 5685526 ~ 5690388 (-) False buc2l
XM_043254042.1 mRNA downstream 46603 5685526 ~ 5689989 (-) False buc2l
XM_043254031.1 mRNA downstream 77647 5628746 ~ 5658945 (-) False aclyb
XM_043254385.1 mRNA upstream 1747 5748277 ~ 5762611 (-) True pkmyt1
XM_043254386.1 mRNA upstream 1747 5748277 ~ 5762603 (-) False pkmyt1
XM_043253168.1 mRNA upstream 128555 5875085 ~ 5878221 (-) True mylpfb
XM_043253059.1 mRNA upstream 271461 6017991 ~ 6022156 (-) True neurod2
XM_043253681.1 mRNA upstream 304638 6051168 ~ 6078068 (-) True LOC122355418
TU127052 other downstream 310081 5423084 ~ 5426511 (-) False lsm5
TU127053 other downstream 310465 5423084 ~ 5426127 (-) True lsm5
TU127021 other downstream 339680 5322478 ~ 5396912 (-) False G85779
TU127027 other downstream 339680 5322478 ~ 5396912 (-) True G85779
TU127020 other downstream 339680 5390608 ~ 5396912 (-) False G85779
TU127203 other upstream 238459 5984989 ~ 5987780 (-) True G85925
TU127212 other upstream 244383 5990913 ~ 6007107 (-) True G85930
XR_006252216.1 other upstream 305193 6051723 ~ 6054353 (-) False LOC122355418
XR_006252215.1 other upstream 317768 6064298 ~ 6073432 (-) False LOC122355418
TU127372 other upstream 923789 6670319 ~ 6671247 (-) True G86049

Expression Profile