RNA id: XM_043253679.1


Basic Information

Item Value
RNA id XM_043253679.1
length 1282
RNA type mRNA
GC content 0.45
exon number 7
gene id LOC122355417
representative False

Chromosome Information

Item Value
chromosome id NC_056710.1
NCBI id CM032079.1
chromosome length 20499150
location 6197482 ~ 6280348 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome
species tiger barb
(Puntius tetrazona)

Sequence

TTATGTTTAGCTGAAGTTGGCGTGAGCGTCAAATATGGAATGTACTGTGGATCATTACACTGCAGGAATGCTGCTCAGCGGTGTAGGAGATGCTCTGGGTTACAGGAATCAACTGTGGGAATACAACCAATCTGGCCCTGCCATCCACCAGATCTTCTCGCAAGATGAAAGAGAGTTTGATTACTTTACTGTAGACTGGAACTCTTGCTTGGTGAAATCCATCCTTACATGCTTAATACCAGGTATTGCACAGTTGCGCCCAGGCACTGAAGGGGGTTACAGGGTGCCGTATAACCCAGAAGCCACAGGTTGTGGGGCAGCCATGAGGTCCATGTGCATTGGCCTTAGATATCCTTATCCTGATCAGCTGTCCTCACTGGTTGAGGTTGCTGTGGAGACTGGAAGAATGACTCATCCTCATCCAACCGGTTTCCTTGGGGCTGTTGCTTCAGCCTTGTTCACCACTTATGCAGTCCAGCGAAGACCAATCACAACCTGGGGTCTGGGTTTATTGGAGGAAGCTTGTCCTgttgcaaaaacatttgttacgTCTGCAGGATATGCTGTTATGGAGACTGAGAGAGACTGGGACTACTTTACTGAAAAATGGAAATGGTATTTGGATCTAAGAGGACTATCTTTGGGGGCTGGGCCAGTTATTTGGCCTGACCAGTATGGGCCAGCAGAACGAGATGAGGCCTACAAGAGGTTCAGTCTGTCAGGTTGGGCTGGTCGAAGTGGTCATGATGCTCCAATGATAGCTCTGGATGCCCTCTTAGGAGCAGGCTTGAACTGGGAGGAACTCATGAGTCGAGCAGGATTTCATGGAGGAGACAGTGACAGTACTGCAGTGATCGCCTGCTGCTGTTGGGGTCTGCTGTATGGAATGGACAGAGTTCCATGGTGTAACTATAGAAACCTGGAGTACAGAGAACGACTGGAGACTGTGGCTCAAAATCTGTATACCCTTTCTCACTGATgaagcaaaactgtaaacagagaaaatacacaaaataaataagtaatataagAATAAGGTGTCACGGTGTCACTATGCTGAATATTTTAGAGCAgttaacatttttcatatattacaTACCCTTAAGGATCATTCACATCGACGACAATTAAATTGCTCTACGTTGTCAATGTCACTTGTAGGTGTACAGCAATCTGGTCACCTTAAAGGCACACATAATCATCAATGAGGTTGCTTTGTTGATGCAAATTACAGTCTATTCTCCTTTcgaattaatgtaaatgttccATGAACTGTATATtc

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU127263 lncRNA downstream 99615 6097060 ~ 6097867 (-) True G85966
TU127230 lncRNA downstream 146832 6050200 ~ 6050650 (-) True G85939
TU127226 lncRNA downstream 163713 6033481 ~ 6033769 (-) True G85935
TU127225 lncRNA downstream 167458 6029733 ~ 6030024 (-) True G85934
TU127211 lncRNA downstream 185371 6007200 ~ 6012111 (-) False G85930
TU127332 lncRNA upstream 158552 6438900 ~ 6439334 (-) True G86017
TU127335 lncRNA upstream 160469 6440817 ~ 6441521 (-) True G86020
TU127339 lncRNA upstream 162470 6442818 ~ 6443073 (-) True G86024
TU127341 lncRNA upstream 162980 6443328 ~ 6443697 (-) True G86026
TU127345 lncRNA upstream 241478 6521826 ~ 6522579 (-) True G86030
XM_043253681.1 mRNA downstream 119414 6051168 ~ 6078068 (-) True LOC122355418
XM_043253059.1 mRNA downstream 175326 6017991 ~ 6022156 (-) True neurod2
XM_043253168.1 mRNA downstream 319261 5875085 ~ 5878221 (-) True mylpfb
XM_043254385.1 mRNA downstream 434871 5748277 ~ 5762611 (-) True pkmyt1
XM_043254386.1 mRNA downstream 434879 5748277 ~ 5762603 (-) False pkmyt1
XM_043253937.1 mRNA upstream 891048 7171396 ~ 7173368 (-) True hexim1
XM_043253936.1 mRNA upstream 894270 7174618 ~ 7182834 (-) False acbd4
XM_043253935.1 mRNA upstream 894270 7174618 ~ 7182834 (-) False acbd4
XM_043253933.1 mRNA upstream 894270 7174618 ~ 7182834 (-) False acbd4
XM_043253934.1 mRNA upstream 894270 7174618 ~ 7182834 (-) True acbd4
XR_006252215.1 other downstream 124050 6064298 ~ 6073432 (-) False LOC122355418
XR_006252216.1 other downstream 143129 6051723 ~ 6054353 (-) False LOC122355418
TU127212 other downstream 190375 5990913 ~ 6007107 (-) True G85930
TU127203 other downstream 209702 5984989 ~ 5987780 (-) True G85925
TU127052 other downstream 770971 5423084 ~ 5426511 (-) False lsm5
TU127372 other upstream 389971 6670319 ~ 6671247 (-) True G86049
TU127438 other upstream 823532 7103880 ~ 7104218 (-) True G86108
TU127575 other upstream 1107888 7388236 ~ 7388910 (-) True G86203
TU128131 other upstream 2067814 8348162 ~ 8359980 (-) False cpped1
XR_006252260.1 other upstream 2237887 8518235 ~ 8518365 (-) True LOC122355888

Expression Profile