Item | Value |
---|---|
RNA id | XM_043253884.1 |
length | 1704 |
RNA type | mRNA |
GC content | 0.44 |
exon number | 9 |
gene id | zgc:171971 |
representative | False |
Item | Value |
---|---|
chromosome id | NC_056710.1 |
NCBI id | CM032079.1 |
chromosome length | 20499150 |
location | 1652449 ~ 1658747 (-) |
genome version | ASM1883169v1_2021_tiger_barb_Genome |
species | tiger barb (Puntius tetrazona) |
id | name | namespace |
---|---|---|
GO:0006383 | transcription by RNA polymerase III | biological_process |
GO:0005666 | RNA polymerase III complex | cellular_component |
GO:0003899 | DNA-directed 5'-3' RNA polymerase activity | molecular_function |
GO:0003677 | DNA binding | molecular_function |
RNA id | RNA type | direction | distance | location | representative | gene id |
---|---|---|---|---|---|---|
TU125824 | lncRNA | downstream | 2315 | 1649461 ~ 1650134 (-) | True | G84892 |
TU125816 | lncRNA | downstream | 24413 | 1626295 ~ 1628036 (-) | True | G84884 |
TU125817 | lncRNA | downstream | 47650 | 1599857 ~ 1604799 (-) | True | G84885 |
TU125814 | lncRNA | downstream | 66499 | 1585749 ~ 1585950 (-) | True | G84882 |
XR_006252202.1 | lncRNA | downstream | 105955 | 1545553 ~ 1546494 (-) | True | LOC122355293 |
XR_006252228.1 | lncRNA | upstream | 51751 | 1710498 ~ 1737269 (-) | True | LOC122355537 |
TU125844 | lncRNA | upstream | 68359 | 1727106 ~ 1729422 (-) | True | G84909 |
TU125854 | lncRNA | upstream | 92655 | 1751402 ~ 1754571 (-) | True | G84919 |
TU125866 | lncRNA | upstream | 306239 | 1964986 ~ 1969050 (-) | True | G84928 |
TU125899 | lncRNA | upstream | 342587 | 2001334 ~ 2001636 (-) | True | G84956 |
XM_043253887.1 | mRNA | downstream | 3687 | 1642834 ~ 1648762 (-) | True | ube2d1b |
XM_043254000.1 | mRNA | downstream | 10452 | 1628163 ~ 1641997 (-) | True | ipmkb |
XM_043254467.1 | mRNA | downstream | 278366 | 1217428 ~ 1374083 (-) | False | pcdh15b |
XM_043253927.1 | mRNA | upstream | 103051 | 1761798 ~ 1774365 (-) | True | fam13c |
XM_043254429.1 | mRNA | upstream | 131262 | 1790009 ~ 1796994 (-) | True | slc16a9b |
XM_043254430.1 | mRNA | upstream | 131262 | 1790009 ~ 1796260 (-) | False | slc16a9b |
XM_043254305.1 | mRNA | upstream | 139311 | 1798058 ~ 1813172 (-) | True | ccdc6b |
XM_043253621.1 | mRNA | upstream | 155336 | 1814083 ~ 1947338 (-) | True | ank3b |
TU125629 | other | downstream | 755419 | 891132 ~ 897030 (-) | False | dlx4b |
XR_006252248.1 | other | downstream | 1292137 | 340273 ~ 360312 (-) | False | prr12a |
XR_006252247.1 | other | downstream | 1292137 | 340273 ~ 360312 (-) | False | prr12a |
XR_006252246.1 | other | downstream | 1292137 | 340273 ~ 360312 (-) | False | prr12a |
TU125247 | other | downstream | 1331189 | 319330 ~ 321260 (-) | True | G84521 |
TU125823 | other | upstream | 212026 | 1870773 ~ 1947412 (-) | False | ank3b |
unassigned_transcript_1807 | other | upstream | 834963 | 2493710 ~ 2493791 (-) | True | trnal-uag_3 |
TU126277 | other | upstream | 1109161 | 2767908 ~ 2781353 (-) | True | G85232 |
TU126462 | other | upstream | 1432038 | 3090785 ~ 3092413 (-) | False | LOC122355711 |
TU126480 | other | upstream | 1599784 | 3258531 ~ 3299688 (-) | False | G85366 |