RNA id: XM_043253910.1


Basic Information

Item Value
RNA id XM_043253910.1
length 1351
RNA type mRNA
GC content 0.44
exon number 6
gene id myoz1b
representative False

Chromosome Information

Item Value
chromosome id NC_056710.1
NCBI id CM032079.1
chromosome length 20499150
location 11529051 ~ 11534953 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome
species tiger barb
(Puntius tetrazona)

Sequence

GTAACACACTGAACTACACCCCCCGCTCCCCAAAGACCTCCTGTCCCAAACGCTCCTAGGATTTCACTCTTCCTGGGATGTAGAAGAGAGCAGTAGTTGGTGGAATCCAAGCCAACCCTAGGAAACAGGATTAACCTCAACAGTTCTCCTGGGAACCTTTGTTTCAAACTGTGATTcgatttgttttctgaaacattGATACTTTGGGCACAGATTGCAGCAATGCCTGTCTCTGGAACACCTGCTCCAACCAACAAGAGGAAGAAGCCTTCAAAAATCATCACAGATTTCTCAAATATCTCACAACATGACCAGCAAGATGAGGATGCTGAAGCTGCTGAACTGGACTTGGGGACCAAAATCAAAGCCCCTAAAGACGTGATGTTGGAGGAGCTGTCCCTCATGAAGAACAAGGGCTCCAAAATGTTCAAGATGAGGCAGCAGAGGGTGGAGAAATTCATCGTCAGTGATGAGAACCAGCTAAACCTTCAGAATCTGGCTCCTTCTTTGGGATGTGAAATGACTCCACCTGAACCCTCTCCCAAACCAGAGCCACCTCAAGTAGAGGAAGTTAATGCTGAGGCAGAGAAGGAAAAGAGACGAAGTGAGTATGTTAAAACCTATGTGTCACCATGGGAACGTGCTATGAAAGATGACAAGGATCTTAAAGAAACCATGAACTTGAAAATGCCAGGGCCTCATGTTCAAAAGGAACTTCCTAAGTACAAGAGTTTCAACAGAATGGCTCTACCCTTTGGAGGATTTGATAAGGCCTCTCGTCTTGTCACCTTTGAGCCCCCAGAGATCAAGGTGAGCGATGAGGAGCCGCAGCCAGTGTCTATGTTGCAGTATAACATTTGCAGTCGGCCTTCTTTCAACCGCACTCCGATCGGCTGGACGTGCAATGAGGATCACAGCCACATTCACACGGAGCTGGAAAACATCCCCTTTGATGGAGAGACTGACGACCTCTAAGAAACCTGCCCACCATATGTGAACAACACAgacatgtataaatacaaaaaacatcaaaacagcaAACGTATTCTAACATGAAGGCCAAGTACACATGCATAAGCACATACACAGACCAGCAAACAGGGACCTTGTGCCAAAAAATTATGACTGATTCATATTTGCAAGAAATGGTGCCTTTGCCTTTTGCCTTTTCTCCCAATGTTTTGTGTGGTGTTTTCTTTGGATGTGTGTCTGCATGTTGTGATTAGCTGGTGCATATGTTATCAGACACATTATGCCTGATTGCACTGCAATGGTATTTATGATACACACAAACTAAATAATAGGCAAAAAAAGATcaagcactaaaataaacatctaCCCCTTAACAGAA

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU129367 lncRNA downstream 210130 11316383 ~ 11318921 (-) True G87414
TU129370 lncRNA downstream 213053 11312472 ~ 11315998 (-) True G87417
TU129457 lncRNA downstream 245465 11278324 ~ 11283586 (-) True G87484
TU129458 lncRNA downstream 245465 11278324 ~ 11283586 (-) False G87484
TU129455 lncRNA downstream 255749 11271741 ~ 11273302 (-) True G87482
TU129509 lncRNA upstream 44236 11579188 ~ 11580353 (-) False LOC122355534
XR_006252227.1 lncRNA upstream 44269 11579221 ~ 11580359 (-) True LOC122355534
TU129560 lncRNA upstream 218097 11753049 ~ 11790926 (-) True G87547
TU129564 lncRNA upstream 264053 11799005 ~ 11799343 (-) True G87551
TU129565 lncRNA upstream 264640 11799592 ~ 11800481 (-) True G87552
XM_043254120.1 mRNA downstream 797 11440769 ~ 11528254 (-) False usp54b
XM_043253908.1 mRNA upstream 1718 11536670 ~ 11550425 (-) True synpo2lb
XM_043254023.1 mRNA upstream 48210 11583162 ~ 11601481 (-) True acsf2
XM_043254290.1 mRNA upstream 72072 11607024 ~ 11612291 (-) False tap2t
XM_043254289.1 mRNA upstream 72072 11607024 ~ 11612291 (-) True tap2t
XM_043254291.1 mRNA upstream 72778 11607730 ~ 11612294 (-) False tap2t
TU129464 other downstream 206448 11321423 ~ 11322603 (-) True G87489
TU129388 other downstream 483169 11042888 ~ 11045882 (-) True LOC122355648
XR_006252200.1 other downstream 2039739 9484946 ~ 9489312 (-) False ormdl3
XR_006252199.1 other downstream 2039739 9484946 ~ 9489312 (-) False ormdl3
TU128627 other downstream 2039761 9481630 ~ 9489290 (-) False ormdl3
TU129586 other upstream 297927 11832879 ~ 11835612 (-) True G87569
TU129639 other upstream 414319 11949271 ~ 11951155 (-) False G87608
TU129915 other upstream 1114431 12649383 ~ 12675472 (-) False prr15lb
TU129914 other upstream 1135673 12670625 ~ 12675472 (-) False prr15lb
TU130001 other upstream 1216952 12751904 ~ 12752678 (-) True G87845

Expression Profile