RNA id: XM_043253920.1


Basic Information

Item Value
RNA id XM_043253920.1
length 4020
RNA type mRNA
GC content 0.44
exon number 2
gene id klhl11
representative True

Chromosome Information

Item Value
chromosome id NC_056710.1
NCBI id CM032079.1
chromosome length 20499150
location 5621138 ~ 5626937 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome
species tiger barb
(Puntius tetrazona)

Sequence

ACTCCTGCGGTGTATGCTGCGTGTGCGCATGTGCATGTCGAGCGCTGTTTATGTTGGAGTGTGTATGTTTGAGTGTGCTCCACCACCTCAACATACTACGCACTTTACGAACCGACCGCGCGGACACCGAGATGGCCGCAGCCGCCCCGAATCCGGAGGACGCCAGCCGAAACAGCGGCGGGCCGAGCACGGCGAGCGCTCTAGCGGGAGACGGGGAGTCTGAGGAGGCCGAGGAGTTTGCATCCGCGACCCATTGCTCGGAGCTCTCCCGGCGGCAGAACGAGCAGCGCAAGCTCGGGCTCTTCTGCGACGTGACGCTGGCGTTCAGCAGCGCCCCAGGAGCCGCGAACAGCTTCGAGTTTAGCGCCCACCGCTCAGTCCTGGCTGCGGCCACGGATTATTTCACGCCGCTGCTCGGGGGTCAGTTTTCGGAGTCGGTGACGCGGCGGGTGGAGATGAAGGAGTGGAGCAGCGAGGCAGGCCTCGACCAGGAGACGGTGGAGAGCGTCATCCAGTTCATGTATACGGGCGAGATACGAGTGAGCACCGCTAACGTGCATGAGGTTCTGGAGCTAGCGGacagGTTCTTGCTTGTGCAGTTGAAAGATTTTTGCGGAGAATTTCTCAAGAGGAAGCTCAGCCTTGGCAACTGTGTGGCCGTCCATAGCCTTGCTCACATGTACACTTTGGACCAGTTGGCCTTACGTGCTGCCGACATGATTCGTCGCAATTTCCATAAAGTTATCCAGGATGATGAATTTTACACACTTCCATTCCATCTGGTGAGAGACTGGCTGTCAGACGCAGAGATTACAGTTGACTCTGAGGAGGTTTTGTTTGATGCAGTTGTCAAATGGGTTCAGAAAAACTCAGACGAACGGGTAAAGTATTTTGAGGAGCTTTTTCGTCTTCTCAGGCTGCCACAGATAAAGCCAACTTATCTTACAAGAGTTGTGAAGAATGAGCCTTTAGTTGCGCAGAATGCTGCCTGCCTACAGCTTGTGTCAGAGGCTGTGGAGGGTCATGCGATCCGCTTTGAGAACCTAAAATCAGCAGATACAGAGTTCTGGGCATCATACATGGCCACATTCCAGCCAAGATTTGGCCAGAACATGGATGTCATCATGGTGGTCGGTGGAGTTTCTGAAGGAGGTGACTACCTGAGTGAGTGCGTAGGGTACTTTGTATACGAAGACCGTTGGGTCAATTTGCCACACATCCATAACCATCTGGATGGGCACGCTATTGCGGCCACTGATACCCATGTATACGTGGCTGGGTCCATGGAACCTGGATTTGCCAAGACAGTAGAGCGCTACAATCCAAATCGCAACACCTGGGAACAAGTGAGCAACCTCACAACACGCAAGCATTCCTTTGGCCTCACCTGCATCAAAAATATTCTGTATAGTATTGGTGGTCATGGCAACTTCAGCCCTGGCTTTAAGGACGTGAGTGTCTACGAACCCGACCAAGACAAGTGGCACAACCTAGAATCGGCTCCTAAGATTTTGAGAGACGTCAAGGCTATTAGCGTAGAAGATCGCTATGTTTATGTCACAGCACGAACGCCCATAGATACTGACAGCGATGATGGGTTGAAGACGGTGACGACTCGCTATGACACCGACAGTCGCCAGTGGCAAGAAGTTGATTCGTTACCGCTTATTGACAACTACTGCTTGTTTCAAATGGCTGTAGCTTCAACTAACTTCTACCACACGGCTTCTTGCTGTCCCAAGAGTTACACCAACGTGCGCGATGATGTAGCTCGTCAAAAGATCAGCGCACGGATATCTGATGATATTCTTGAGAGCCTTCCCCCAGAGGTTACTAGTATTGAGGGTGCTGCCATCTGCTATCTTGGTGATGATGTGTTTGTGATTGGTGGCTGGAAGAACAGTGACGATGTGGATAAGCAGTATCGCAAAGAGGCGTACCGTTATTGCGCTGAGCGCAAACGCTGGATGCTTCTGCCGCCAATGCCTCAGCCACGCTGTCGTGCCACAGCATGTCACGTTCGCATTCCCTACCGCTTTCTATACGGCTGTCAGCGTTACCCAATGCCACAAAATTTGGCGCGCCAGAGGGACCGTATGCAGCAAATGCAACAGTTACATCGTCGCACGTTAACTCTACGCAGGCAGTTACAATCACAAATTGAATGCTGAGGGCCCTTCttgctcaaaagaaaaaaaactgctgcaaaaatCATGATAATATAGTGTCTTGAGCATTCCCATGATCCCATTCTTATtcaaatgtgtattatttgtttacttGTGACTTTTCATCACTGGGAGAGTGGATGAAATGGCTGAAGCTAGTAAAGAGAGTATTTTCAGTGTGACTTTGTATAATGGaatcatataaatatgtaaaaaagatACGTTTGTAAATATCTGTAAACATGAAACATTGTTTCATGGCCTTGCATGAATTTGCCTTATTCCCGCTGTCTGCAATTTGCAAAATGCTGCACATTGCTCATTTATCTTGAGTCATAATGTTCCATGTGGTGATGGTTGTCCTGCTAAATTCGTGGGTTTTTAGGTTGTTTGCTTTGCAAGGTGTGAAACCATTTTTCCCAGCTTGTTCAAACGCTCACAAGTTTTGAACAAaccatttataattacaaaaagaacCACTACATATTTATTCCCTTTGCTTGTAAATTACTTTCTGGTTTCTAGTTTCTGGTcttaattgtgatttaattttatttgtcttgCACTTGTTTGTCAATGCAATTTTTGTTCATATGTGCAAAAATGCATTCTTCACAACTACAAGCACTTAATTTCAGCATTAGCCCTTGTCTTAATCTTTGTTCTTATAGTTTGattatatttgttctttttcacaGGGAATAGAGACCGTTACGGCATTGGTTGTTGATGCATGAAGGTTACACCtaacaaaatagcaaaaccATAGATGTTCAGAAAATAGTCAAGGATTCATTACCTCGTTGTCCAGGGCAGGATtttgttacttaaaaataatttgtcattGGTGTTTTGCGGTCCATGCCAGTTTGAGATATTTCAGCTTCCTTGATTGACTTGTTTTCACTCGTATATCTTTTTAGCAGCCTCATCAGCTTGTGCTCTGTCATCCAATTCCTGTCAAGAATTAAGTTAACATTTCCCATAAGTCAACTGTAGTTGTCCATTCCAAATTTAATAAGGCACCTACTGATGGTACCCACACTGCATCTTTGTGTTTGTTACATATATAAACGCTAtttataaccattttttttttattggaaatattttttttctatctttcatCTACATTCCCTCTTTGTATCTCCTCTTTTACAATGATGTCTTTTATTACAAGAAATCTGCATTTCACTTGGGTGAAAATTTGTTAAGTGATCATTGGCACCATCAAGACCAGAAAACATTTCGTAATGTTCGCCTGAAGAACATTTAGCCGTTACTACAGTCCATACCAAAGTCTTAAAGTGTCATCTTAGATGAAGTAATGTTATGCTTCGATGTTAAAATCTCTACTAAATGCAAGATAGAAATGGCTTTGACAGTGTATCTGTAGCTCTTGTCTTGACTTGTGCAGAGTTCCATTGTCATTTCATATGGGAAAATCCCTGTAAGACATATGTTGAACATACATTATTAAgcctttttcaaacattttcctGCATATTGGAGACTCTGTAGAATCTTAGATATTGTATTTACTCAATGGGAAATGTAAGTTTTGTGTCTCTCATGTTGAGATGTGAATTAATAGTGTTTAAGATCTATATCAGTTTCTTTCCTTCTTGCACAGAGGAAATGAgtgtgtatgtacgtgtgtgtgtgtgtatgtatgtgtgtgtcaatgGCGAAAATGTCTGACAATAAGAGTAGCAAGGCTGGGATAATACCTTGTCCCGCTCTCGTTGTTGTAAAGTCTTTTAAGGGCGAGTATAGTTCTTTGCATGTGTTATAAAGTATGCACATGTTGTGGATCTCAGTgatttgcaataaatatttattaaaaatctga

Function

GO: NA

KEGG:

id description
K10449 KLHL11; kelch-like protein 11

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU127056 lncRNA downstream 194627 5423084 ~ 5426511 (-) False lsm5
TU127055 lncRNA downstream 195011 5423084 ~ 5426127 (-) False lsm5
TU126767 lncRNA downstream 1167862 4452755 ~ 4453276 (-) True G85572
TU126762 lncRNA downstream 1207776 4412624 ~ 4413362 (-) False LOC122355055
TU126764 lncRNA downstream 1208938 4411340 ~ 4412200 (-) True G85569
TU127129 lncRNA upstream 100367 5727304 ~ 5731090 (-) True G85868
TU127155 lncRNA upstream 183720 5810657 ~ 5814446 (-) True G85889
TU127161 lncRNA upstream 193412 5820349 ~ 5821178 (-) True G85891
TU127162 lncRNA upstream 210435 5837372 ~ 5837674 (-) True G85892
TU127163 lncRNA upstream 211622 5838559 ~ 5838957 (-) True G85893
XM_043253254.1 mRNA downstream 7931 5602681 ~ 5613207 (-) True dbf4b
XM_043253255.1 mRNA downstream 7931 5604270 ~ 5613207 (-) False dbf4b
XM_043253870.1 mRNA downstream 20475 5564608 ~ 5600663 (-) True adam11
XM_043253872.1 mRNA downstream 20680 5569337 ~ 5600458 (-) False adam11
XM_043253871.1 mRNA downstream 25574 5569336 ~ 5595564 (-) False adam11
XM_043254031.1 mRNA upstream 1809 5628746 ~ 5658945 (-) False aclyb
XM_043254030.1 mRNA upstream 1809 5628746 ~ 5658945 (-) True aclyb
XM_043254041.1 mRNA upstream 58589 5685526 ~ 5690389 (-) True buc2l
XM_043254040.1 mRNA upstream 58589 5685526 ~ 5690388 (-) False buc2l
XM_043254042.1 mRNA upstream 58589 5685526 ~ 5689989 (-) False buc2l
TU127052 other downstream 194627 5423084 ~ 5426511 (-) False lsm5
TU127053 other downstream 195011 5423084 ~ 5426127 (-) True lsm5
TU127021 other downstream 224226 5322478 ~ 5396912 (-) False G85779
TU127027 other downstream 224226 5322478 ~ 5396912 (-) True G85779
TU127020 other downstream 224226 5390608 ~ 5396912 (-) False G85779
TU127203 other upstream 358052 5984989 ~ 5987780 (-) True G85925
TU127212 other upstream 363976 5990913 ~ 6007107 (-) True G85930
XR_006252216.1 other upstream 424786 6051723 ~ 6054353 (-) False LOC122355418
XR_006252215.1 other upstream 437361 6064298 ~ 6073432 (-) False LOC122355418
TU127372 other upstream 1043382 6670319 ~ 6671247 (-) True G86049

Expression Profile