RNA id: XM_043253921.1



Basic Information


Item Value
RNA id XM_043253921.1
length 3275
RNA type mRNA
GC content 0.42
exon number 10
gene id fkbp10b
representative True

Chromosome Information


Item Value
chromosome id NC_056710.1
NCBI id CM032079.1
chromosome length 20499150
location 5614079 ~ 5621340 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome
species tiger barb
(Puntius tetrazona)

Sequence


CGTTTACACATTCGAGCTCCTCCTACAGGAGCCCACAACTGACTGCACAGTGTACAAGCCTCACTCACAGGCtgcaatttctttaaaatggttCGGAGGGTTACTTTGAGTTTGTTGCTGGCGACGTGGTTCTCCGTGGACTGTAACCCCGGGCCTATCGATGATATCGCAGTTGATCGATACTTCATTCCTAAGCGCTGCATCAGAGAAGTGAAATCAGGAGATTTCGTGCGGTATCACTATAACGGCACTTTTACTGACGGAAAACTGTTTGACTCTAGCTATGATAGGGGGGCTGCATTTTTTGGACAGGTGGGCCAAAAGTGGCAAATTGCTGGTGTGGACAAGGGCATTCTGGGTATGTGCGTGAATGAGCGTAGGAAGATCACTGTACCCCCCCACTTGGCCTATGGTAGCCAAGGAGCAGGTGATAAGGTGCCGCCAGACACAACATTAGTGATCGATCTGGTTCTACTGGACATTTTTAACAGGGCAGACCAGGTTCAGACCAAAGTCATCAGTACGCCCAAAGAATGCAAACGCTCGGTCATGAGGACTGACTTTGTGCGTTTTCACTTTAATGGAACGTTGCTGGATGGCACCGAGTTTGACTCCAGCTACAAGCGTTCCCAGACGCAGGATTCGGTAGTTGGGGAAGGTTGGCTCATAAAAGGCTTGGATGAAGGGTTGCTGGGCATGTGTGTGGGAGAAATACGACACTTCATCATCCCCCCATTTCTGGCATTTGGAGAAAAAGGATATGGCACAGAAATCCCTCCTCATGCATCATTAGTGTATCACCTTCTCCTGGAAGACCTCCACAACCCTAAAGATGACATTATTGTGGAGGTCGTTGAAGCGCCTGAACCATGTGCACGCAAGTCTGTTGCGGGCGATTACATTCGTTATCACTACAATGCTTCCTTCCTCAATGGCATCGCATTTGACTCCAGCTATCAGCACAACCAGACGTACAACACATACATTGGAATGGGTTACATGATTTCTGGCATAGATAAAGGCTTGCAGGGTGTGTGTACAGGAGAGAGGAGAAGAATCATCTTGCCTCCCCATCTTGCATATGGCCAGCAGGGGGCAGGTAAGGACATTCCAGCTTCAGCCGTGTTGGTCTTTGACATCCATGTGATAGACTTCCACAACGTTAAAGATCCTGTGCATATAGAGATCACACATAAACCTGAGGTGTGTAATGAAACCAGTGAGGTGAATGACTTCATAGAGTACCACTACAACTGCTCGCTGCTGGACGGCATGCTGCTTTTTACGTCGAGGGACTATGAGAACCCACAGGATGTGCTTCTTGGAGGGGGTAAAATAATTGATGGCCTAGATGAGGCTCTAAGGAATATGTGTGTAGGAGAGAGACGGACGGTCATAGTGCCACCACACCTTGGGCATGGAGAGAAAGGAGCCGGCATTGTCCCAGGGAGTGCAGTGCTACGGTTCGAGCTGGAGTTGGTGTCCCTGCAGAAGGGGGTTCCTGAAGGCTACCTATTCATTTGGCTCGAAGAGAGTCCGGTTCAGCTGTTTGAGGCACTAGACAGCAACCAGGACCAACAGGTCCCTTTAGAGGAGTTTTCACAGTTCATCAAACAGCAGGTCTTAGAAGGAAAAGGCCGTCTTAAACCAGCTCAGGATCCAGATAGTGTCATCAGGGATATGTTCAAGAACCAGGATAGGAACGCTGATGGCTTGATCACCCAGGATGAGCTAAAACTAAAAGTGGATGAAGATGTAGAGAAAACACGCCATGAAGAACTGTGAAACGTTTTCACAAAAGCATGTGAATCTACATGCATTCAGAGAGAACAAGCAACAGACTCATAATCCTGAGGCTGAAAACCGGAACATGCTTTCCAGTATTAAAAGTTTGTACATTTGATggtcacatatttttatactcTTAAAAATGTTGGATCtcagaaatgtatttgtgtcattgaataaaatgtctaaaactaGGGTActtgcaaacattttatttttaaattatatggcAGGGGTGGCCAACATCAATCCTGGAGTTTAGCTCCAATTTTGATAAAAACTCACCTGATTCGAAATTTGTGGCAACCCTTAGACTTGGATtagcttgtttgtgtttgtttgattaagGTTGGAATGAAACTCTGCAAGACTCTTTCTCAGAGTGAGCTATTTTTGAGGTCACTTGTAAACCAAGTTTTCCTGTAGTCGAGATCAAAGTATAGctgcaatacaaataaaaactcaaaatgaaCTGCTGTTACTAAGCAGACAGTTTTAGTCCcaataagtactaaaataatacagttgtctacaaatacaaatacattattttagaaCACTTGCTACATGGGGTATAGTTGGTAATATATAACACTGTTAAGCGTGAAATATACttttttggtagcactttatttagGGTCTcctaactagttgcttattagcatgtatagGGCAAGataattagtcatttattagtagtaattaagcacatattaatgcctttcTCTAAATGACATTATTCCATAATCTAACCTAATCCTACCGATACCTAAACTTAAAttccttactattaataagtattccttattctaaagtgttacccccttttattcattcattcatttattggtAAGGGTCATTTCTTTGTTTAGAATTCTTTTCTGTGATAGAGCTATATGCATTTTGAATGTGAATGCAGATgaaattagcatattttaaactTGATGGATGTAGCCATGTTTAAATTATTCTATTTCTGCCAAATCATTTTATTGGTTTCTATTGGACTTTGTGCATATGTGGTGACCAAAACTGTACCATTGAATTGGCAAAAGGTTTCCctcaacatatatatttttattttcatttgaccATATTGCCTATAGACACTTGTTGATTATAACGTAAGGAGCAAAATATCTTTTCAATTTGCACATAATCGAGCAGAAGAATGATCACATTCCATGTGAAAATGCATTgatcataaatgcataaattttaGTAGACATGATAGTAATGGCACTCCAGGAAGGGTATGAACAAGGCAACAACTCTTGGACAATatcagatttttaataaatatttattgcaaatcACTGAGATCCACAACATGTGCATACTTTATAACACATGCAAAGAACTATACTCGCCCTTAAAAGACTTTACAACAACGAGAGCGGGACAAGGTATTATCCCAGCCTTGCTACTCTTATTGTCAGACATTTTCGCcattgacacacacatacatacacacacacacacgtaca

Function


GO:

id name namespace
GO:0000413 protein peptidyl-prolyl isomerization biological_process
GO:0006457 protein folding biological_process
GO:0016020 membrane cellular_component
GO:0005509 calcium ion binding molecular_function
GO:0005528 FK506 binding molecular_function
GO:0003755 peptidyl-prolyl cis-trans isomerase activity molecular_function

KEGG:

id description
K09575 FKBP9_10; FK506-binding protein 9/10

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU126935 lncRNA upstream 11898 5601474 ~ 5602181 (+) True G85713
TU126906 lncRNA upstream 117845 5495107 ~ 5496234 (+) True G85687
TU126904 lncRNA upstream 121145 5491714 ~ 5492934 (+) True G85685
TU126902 lncRNA upstream 128330 5483574 ~ 5485749 (+) True G85683
TU126891 lncRNA upstream 167360 5445407 ~ 5446719 (+) False drosha
TU126989 lncRNA downstream 190909 5812249 ~ 5816315 (+) False LOC122355829
TU127011 lncRNA downstream 200091 5821431 ~ 5821687 (+) True G85774
TU127179 lncRNA downstream 336554 5957894 ~ 5958234 (+) True G85905
TU127264 lncRNA downstream 476788 6098128 ~ 6098334 (+) True G85967
TU127269 lncRNA downstream 479822 6101162 ~ 6118513 (+) False G85971
XM_043253874.1 mRNA upstream 49325 5543755 ~ 5564754 (+) True ppp1r16a
XM_043254357.1 mRNA upstream 81172 5510698 ~ 5532907 (+) True oplah
XM_043254437.1 mRNA upstream 137415 5452829 ~ 5476664 (+) True kcnh4b
XM_043254292.1 mRNA upstream 167392 5426581 ~ 5446687 (+) True drosha
XM_043254307.1 mRNA upstream 190662 5420706 ~ 5423417 (+) True psme2
XM_043254048.1 mRNA downstream 47560 5668900 ~ 5684328 (+) False si:ch211-217a12.1
XM_043254046.1 mRNA downstream 47568 5668908 ~ 5684328 (+) True si:ch211-217a12.1
XM_043254047.1 mRNA downstream 50011 5671351 ~ 5684328 (+) False si:ch211-217a12.1
XM_043254043.1 mRNA downstream 70018 5691358 ~ 5699906 (+) False kbtbd2
XM_043254044.1 mRNA downstream 70653 5691993 ~ 5699906 (+) True kbtbd2
TU126784 other upstream 524441 5088925 ~ 5089638 (+) True G85587
TU126761 other upstream 1160804 4452855 ~ 4453275 (+) True G85567
TU126759 other upstream 1194866 4418247 ~ 4419213 (+) True LOC122355720
TU126747 other upstream 1210399 4401131 ~ 4403680 (+) False LOC122355090
TU126733 other upstream 1336694 4275344 ~ 4277385 (+) True ndufa4b
XR_006252205.1 other downstream 265612 5886952 ~ 5953312 (+) False becn1
XR_006252206.1 other downstream 265612 5886952 ~ 5943580 (+) False becn1
TU127259 other downstream 474608 6095948 ~ 6096732 (+) True G85962
TU127298 other downstream 593579 6214919 ~ 6216567 (+) True G85986
TU127334 other downstream 819481 6440821 ~ 6441526 (+) True G86019

Expression Profile