Gene
RNA
| Item | Value |
|---|---|
| RNA id | XM_043253925.1 |
| length | 1331 |
| RNA type | mRNA |
| GC content | 0.43 |
| exon number | 13 |
| gene id | dmc1 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_056710.1 |
| NCBI id | CM032079.1 |
| chromosome length | 20499150 |
| location | 8528745 ~ 8531253 (-) |
| genome version | ASM1883169v1_2021_tiger_barb_Genome |
| species | tiger barb (Puntius tetrazona) |
| id | name | namespace |
|---|---|---|
| GO:0006200 | obsolete ATP catabolic process | biological_process |
| GO:0007131 | reciprocal meiotic recombination | biological_process |
| GO:0006281 | DNA repair | biological_process |
| GO:0005634 | nucleus | cellular_component |
| GO:0005524 | ATP binding | molecular_function |
| GO:0003690 | double-stranded DNA binding | molecular_function |
| GO:0000150 | recombinase activity | molecular_function |
| GO:0003697 | single-stranded DNA binding | molecular_function |
| GO:0008094 | DNA-dependent ATPase activity | molecular_function |
| id | description |
|---|---|
| K10872 | DMC1; meiotic recombination protein DMC1 |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU128374 | lncRNA | downstream | 15500 | 8511635 ~ 8513245 (-) | True | LOC122355061 |
| TU128139 | lncRNA | downstream | 184136 | 8344336 ~ 8344609 (-) | True | G86608 |
| TU128137 | lncRNA | downstream | 188930 | 8339456 ~ 8339815 (-) | True | G86606 |
| TU128132 | lncRNA | downstream | 190045 | 8334407 ~ 8338700 (-) | False | cpped1 |
| TU128087 | lncRNA | downstream | 238335 | 8290080 ~ 8290410 (-) | True | G86576 |
| TU128385 | lncRNA | upstream | 4720 | 8535973 ~ 8538206 (-) | True | G86775 |
| TU128416 | lncRNA | upstream | 66141 | 8597394 ~ 8628972 (-) | True | G86798 |
| TU128428 | lncRNA | upstream | 92044 | 8623297 ~ 8626329 (-) | True | G86807 |
| TU128431 | lncRNA | upstream | 95841 | 8627094 ~ 8630207 (-) | True | G86809 |
| TU128455 | lncRNA | upstream | 144393 | 8675646 ~ 8747077 (-) | True | G86825 |
| XM_043253923.1 | mRNA | downstream | 271 | 8520500 ~ 8528474 (-) | True | gspt1 |
| XM_043253924.1 | mRNA | downstream | 8692 | 8517178 ~ 8520053 (-) | True | rsl1d1 |
| XM_043254353.1 | mRNA | downstream | 13562 | 8514713 ~ 8515183 (-) | True | LOC122355801 |
| XM_043253017.1 | mRNA | downstream | 15480 | 8511403 ~ 8513265 (-) | False | LOC122355061 |
| XM_043253016.1 | mRNA | downstream | 15481 | 8511403 ~ 8513264 (-) | False | LOC122355061 |
| XM_043253014.1 | mRNA | upstream | 731 | 8531984 ~ 8534641 (-) | True | tomm22 |
| XM_043253405.1 | mRNA | upstream | 9966 | 8541219 ~ 8549833 (-) | True | tmem184ba |
| XM_043253403.1 | mRNA | upstream | 9966 | 8541219 ~ 8549831 (-) | False | tmem184ba |
| XM_043253404.1 | mRNA | upstream | 9966 | 8541219 ~ 8549829 (-) | False | tmem184ba |
| XM_043253205.1 | mRNA | upstream | 19131 | 8550384 ~ 8555651 (-) | True | csnk1e |
| XR_006252259.1 | other | downstream | 9636 | 8518980 ~ 8519109 (-) | True | LOC122355887 |
| XR_006252260.1 | other | downstream | 10380 | 8518235 ~ 8518365 (-) | True | LOC122355888 |
| TU128131 | other | downstream | 168765 | 8348162 ~ 8359980 (-) | False | cpped1 |
| TU127575 | other | downstream | 1139835 | 7388236 ~ 7388910 (-) | True | G86203 |
| TU127438 | other | downstream | 1424527 | 7103880 ~ 7104218 (-) | True | G86108 |
| TU128398 | other | upstream | 79299 | 8610552 ~ 8612445 (-) | True | G86783 |
| XR_006252240.1 | other | upstream | 151799 | 8683052 ~ 8687548 (-) | False | plbd1b |
| unassigned_transcript_1920 | other | upstream | 156245 | 8687498 ~ 8687570 (-) | True | trnar-ccu_66 |
| TU128530 | other | upstream | 344364 | 8875617 ~ 8878112 (-) | True | LOC122355288 |
| TU128628 | other | upstream | 950306 | 9481559 ~ 9489290 (-) | False | ormdl3 |
