RNA id: XM_043254237.1



Basic Information


Item Value
RNA id XM_043254237.1
length 668
RNA type mRNA
GC content 0.51
exon number 3
gene id crygmxl2
representative True

Chromosome Information


Item Value
chromosome id NC_056710.1
NCBI id CM032079.1
chromosome length 20499150
location 13555693 ~ 13557090 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome
species tiger barb
(Puntius tetrazona)

Sequence


CGTTTTCAAAGGTAAACTCTAGTTTCTGTGACGTGCCTCTGGCAGCAGTGTGTATACATCTGTAGAAGAGTATAAAAGGTCCACCAGGACCTCGATGGCAGTACGGCAGAACGGCGTGGACATCCTGCTCTGCAGCCATGGGAAAGATCATCTTCTACGAAGGCTCCAACTTCCAGGGGCGCTCTTATGAGTGCTCTGCTGACTGCACTGACACTTTTAGATACTTCAACTGCTGCAACTCCATACGGGTCATGGGGGGTCACTGGGTGGGCTACGAGAAGCCCTACTATATGGGGTATCAGTACATCCTGGGCCGTGGGGAGTATCCTAACTTTCACCACTGGATGGGCTTCAACAGTTGTATCAGATCTTGTCAGATGTTCCCCCCATACAGAGGTGCCTACCGCATGAGAATCTACAACAGACCTGAAATGTACGGAAACATGATGGAGTTCACAGATGACTGCCCCAATGTCTACGACCGTTTTGGCTACCACGGCATCTACTCCTGTAACTGTATGGAGGGCTACTGGTGCTTTTACGAGCACCCCAATTACAGAGGGCGTCAGTATTTCCTGCGGCCCGGAGAGTACAGAGCCTGCAGCGAATGGGGTTGCATGAATCCCATGATTGGCTCCTTTAGGAGAATGAGGAGCAGTTTAATGTAA

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU130329 lncRNA downstream 16310 13538691 ~ 13539383 (-) False entpd1
TU130281 lncRNA downstream 94448 13460145 ~ 13461245 (-) True G88035
TU130280 lncRNA downstream 95828 13458456 ~ 13459865 (-) True G88034
TU130263 lncRNA downstream 121568 13433894 ~ 13434125 (-) True G88019
TU130253 lncRNA downstream 123498 13429406 ~ 13432195 (-) False LOC122355808
XR_006252233.1 lncRNA upstream 151965 13709055 ~ 13712541 (-) True LOC122355666
TU130373 lncRNA upstream 152976 13710066 ~ 13710267 (-) False LOC122355666
TU130423 lncRNA upstream 267510 13824600 ~ 13894358 (-) True G88146
TU130511 lncRNA upstream 436570 13993660 ~ 13994186 (-) True G88205
TU130512 lncRNA upstream 437282 13994372 ~ 13995952 (-) True G88206
XM_043254360.1 mRNA downstream 668 13553556 ~ 13555025 (-) True crygmx
XM_043253502.1 mRNA downstream 15392 13523668 ~ 13540301 (-) True entpd1
XM_043253501.1 mRNA downstream 25702 13523668 ~ 13529991 (-) False entpd1
XM_043254186.1 mRNA downstream 110961 13436907 ~ 13444732 (-) False casp7
XM_043254187.1 mRNA downstream 110964 13436907 ~ 13444729 (-) True casp7
XM_043253770.1 mRNA upstream 52330 13609420 ~ 13691337 (-) False tcf7l2
XM_043253759.1 mRNA upstream 52330 13609420 ~ 13691337 (-) False tcf7l2
XM_043253766.1 mRNA upstream 52330 13609420 ~ 13691337 (-) False tcf7l2
XM_043253760.1 mRNA upstream 52330 13609420 ~ 13691337 (-) False tcf7l2
XM_043253762.1 mRNA upstream 52330 13609420 ~ 13691337 (-) False tcf7l2
TU130001 other downstream 803015 12751904 ~ 12752678 (-) True G87845
TU129915 other downstream 880221 12649383 ~ 12675472 (-) False prr15lb
TU129914 other downstream 880221 12670625 ~ 12675472 (-) False prr15lb
TU129639 other downstream 1604538 11949271 ~ 11951155 (-) False G87608
TU129586 other downstream 1720081 11832879 ~ 11835612 (-) True G87569
XR_006252221.1 other upstream 54644 13611734 ~ 13691339 (-) False tcf7l2
XR_006252219.1 other upstream 54644 13611734 ~ 13691338 (-) False tcf7l2
XR_006252218.1 other upstream 54646 13611736 ~ 13691338 (-) False tcf7l2
XR_006252220.1 other upstream 57057 13614147 ~ 13691338 (-) False tcf7l2
XR_006252179.1 other upstream 415792 13972882 ~ 13976511 (-) False srsf2a

Expression Profile