RNA id: XM_043254422.1


Basic Information

Item Value
RNA id XM_043254422.1
length 1899
RNA type mRNA
GC content 0.55
exon number 14
gene id LOC122355848
representative False

Chromosome Information

Item Value
chromosome id NC_056710.1
NCBI id CM032079.1
chromosome length 20499150
location 103795 ~ 111126 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome
species tiger barb
(Puntius tetrazona)

Sequence

ACCGCTAAACTAACCCGTTTAACTAGCGCGTTTCGCCGCGATATCGGAGGTAACGCGGGAATGATATCGGCTTGAGAGCGGCGggtcgcgtcgcgtcgcgtcggTTTGCTCGCCGAAGCTCAAAGTTCATGTCGTGTTAGTTTGTTGAGcCCCTGTTACCAGGTTGAAGTGTCAATCACTCTGAAGCCCCGCCCATCATGACGGAGGTCAGCGTGGTGAAGGAAGGATGGCTTTATAAACGAGGTGAGTACATAAAGACATGGAGGCCGAGATACTTCATCCTGAAGAGCGATGGATCCTTCATGGGTTACAAGGAGAAGCCGGAGCTGATGGATCAGAGCTCAGCTCCTCTCAATAACTTCTCTGTGGAAGAGTGTCAGCTGATGAAGACCGAGCGTCCACGACCCAACACCTTCATGATCCGCTGTCTGCAGTGGACGAGCGTCATCGAGAGGACCTTTCACGTGGAGAGCAGTGAGGAGAGGGACGAGTGGATGCGAGCGATCCAGGCCGTGGCCAATGGGCTGCAGGCGCGGGACGCAGACGAGCCAATGGAGATCAAGTTCAGCTCTCCCGGGGACTTCAGCGCTCTGGAGGACATGGAGGTGTCTCTGTCCAAGTCCAGCTCCAGAGTGACGATGAATGACTTTGATTACCTGAAGCTGCTGGGTAAAGGCACGTTTGGGAAGGTGATTCTGGTTCGAGAGAAAGCCTCAGGGATGTACTACGCCATGAAGATCCTGCGGAAGGAAGTCATCATCGCTAAGgatgaAGTGGCACATACAGTTACAGAGAGTCGAGTGCTGCAGAACACCAGACATCCTTTCCTCAcgACTCTTAAATACGCCTTCCAGACTCCTGACCGGCTGTGTTTTGTGATGGAGTATGCTAACGGAGGAGAGCTCTTCTTCCATCTCTCCCGTGAGCGGGTCTTCTCTGAGGACAGAGCCCGGTTCTATGGTGCTGAGATCGTCTCTGCTCTCGACTATCTTCACTCTCAGAACGTCGTCTACAGGGACCTGAAGCTGGAGAACCTCATGCTGGATAAAGACGGACATATTAAGATCACAGACTTCGGTCTCTGTAAGGAGGGGATCACCGACGAGGCCACCATGAGAACGTTCTGTGGAACCCCAGAATACCTTGCTCCAGAGGTGCTGGAGGACAACGACTACGGCCGAGCGGTGGACTGGTGGGGTCTGGGGGTGGTCATGTATGAGATGATGTGTGGACGCCTGCCCTTCTACAACCAGGACCACGAGCGGCTCTTCGAGCTCATCGTGATGGAGGAGATCCGCTTCCCCAAGAACCTCTCGCCCGAAGCCAAAGCCCTGCTGACCGGCCTGCTGAGAAAAGACCCCAAGCAGAGgCTGGGGGGCGGAGCCGAAGACGCCAGAGAAGTGATGGGGCACAAGTTCTTCTTCTGCGTTCACTGGGAGGACGTGCTGCAGAAAAAGCTGGTGCCTCTCTTTAAACCTCAGGTGACGTCGGAGACGGACACGCGCTACTTCGACGACGAGTTCACGGCACAGAGCATCACTGTGACTCCACCGGACAAGCGTAAGATAAAAACACCTCTCACGTGGAGCGAGCCGCCGGGACGTGGAGGACTCTGGGCCGGTCGCTCACTTTCCTCAGTTCTCTTACTCCGCCAGCGTACGAGAGTGACTCCGTCCCATAATGCATCTGGATGGACTGAAGTCACGCGTGTCTCAGATGAATGTATTGATTAGCGGTGCTCAGAATGTAAAGCCAGGCACGCTGCTGTGGTTCCTCTTAATCACCGGAGGAAGACGAGCAGCGCGTCATTTTAAGTCCGTTTCTGTCACGAGGTCACAGACAAACACTAAGTGTCACGATCACAATCACAAACATTAAAGACTTTCATCCTGTCCCTCA

Function

GO:

id name namespace
GO:0046326 positive regulation of glucose import biological_process
GO:0043066 negative regulation of apoptotic process biological_process
GO:0006468 protein phosphorylation biological_process
GO:0005524 ATP binding molecular_function
GO:0004674 protein serine/threonine kinase activity molecular_function

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU125191 lncRNA downstream 14221 88055 ~ 89574 (-) True G84492
TU125183 lncRNA upstream 29206 140100 ~ 141081 (-) True G84487
TU125201 lncRNA upstream 57230 168124 ~ 171286 (-) False LOC122355191
XR_006252194.1 lncRNA upstream 86007 196901 ~ 197393 (-) True LOC122355221
XR_006252193.1 lncRNA upstream 86506 197400 ~ 198867 (-) True LOC122355220
XR_006252187.1 lncRNA upstream 271678 382572 ~ 385020 (-) True LOC122355197
XM_043254421.1 mRNA downstream 40752 44012 ~ 63043 (-) False LOC122355847
XM_043253242.1 mRNA upstream 57154 168048 ~ 171295 (-) False LOC122355191
XM_043253241.1 mRNA upstream 57154 168048 ~ 171295 (-) True LOC122355191
XM_043253257.1 mRNA upstream 60868 171762 ~ 176703 (-) True LOC122355205
XM_043254320.1 mRNA upstream 82839 193733 ~ 208068 (-) True LOC122355756
XM_043253266.1 mRNA upstream 107320 218214 ~ 222873 (-) True LOC122355212
TU125192 other downstream 9994 91490 ~ 93801 (-) True G84493
TU125175 other downstream 19650 81280 ~ 84145 (-) False G84486
TU125178 other downstream 22956 78617 ~ 80839 (-) False G84486
TU125172 other downstream 84262 12045 ~ 19533 (-) False G84485
TU125173 other upstream 4825 115719 ~ 122767 (-) False G84485
TU125247 other upstream 208436 319330 ~ 321260 (-) True G84521
XR_006252248.1 other upstream 229379 340273 ~ 360312 (-) False prr12a
XR_006252247.1 other upstream 229379 340273 ~ 360312 (-) False prr12a
XR_006252246.1 other upstream 229379 340273 ~ 360312 (-) False prr12a

Expression Profile