RNA id: XR_006252235.1


Basic Information

Item Value
RNA id XR_006252235.1
length 308
lncRNA type inter_gene
GC content 0.43
exon number 3
gene id LOC122355669
representative False

Chromosome Information

Item Value
chromosome id NC_056710.1
NCBI id CM032079.1
chromosome length 20499150
location 7001006 ~ 7002149 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome
species tiger barb
(Puntius tetrazona)

Sequence

CTCGATAGCCACACCAACACGATGTATTGTGTTGACCTACTGAGTGTGGAATATACCTGGAAAAAagtgacagacacagtgggaGGGACACCCTCTCCCAGAGCAAGACATTCCTGCTGGGTCTACAAAAACAGGCTAGTCTACTTTGGAGGATATGGCTGCAAAACAGCCAGAGAGGTCAACAAAACCAAGAGCTTTATGGTTGATGAGGCTAGCTGGGTGAGGAGAaagattgtgaaaaaaaaatgaacagctAAAGTTGTTGTACAGTAGTAGAGTTAGTTTaccctgattttttttaatacagg

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU127418 lncRNA downstream 35595 6965090 ~ 6965411 (-) True G86091
TU127371 lncRNA downstream 331542 6668927 ~ 6669464 (-) True G86048
TU127347 lncRNA downstream 477349 6522913 ~ 6523657 (-) True G86032
TU127345 lncRNA downstream 478427 6521826 ~ 6522579 (-) True G86030
TU127341 lncRNA downstream 557309 6443328 ~ 6443697 (-) True G86026
TU127422 lncRNA upstream 111 7002260 ~ 7002931 (-) True G86094
TU127426 lncRNA upstream 5677 7007826 ~ 7009113 (-) True G86096
TU127428 lncRNA upstream 9054 7011203 ~ 7011430 (-) True G86098
TU127548 lncRNA upstream 281737 7283886 ~ 7285998 (-) True G86184
TU127551 lncRNA upstream 284261 7286410 ~ 7287752 (-) True G86185
XM_043253679.1 mRNA downstream 720658 6197482 ~ 6280348 (-) False LOC122355417
XM_043253937.1 mRNA upstream 169247 7171396 ~ 7173368 (-) True hexim1
XM_043253936.1 mRNA upstream 172469 7174618 ~ 7182834 (-) False acbd4
XM_043253935.1 mRNA upstream 172469 7174618 ~ 7182834 (-) False acbd4
XM_043253933.1 mRNA upstream 172469 7174618 ~ 7182834 (-) False acbd4
XM_043253934.1 mRNA upstream 172469 7174618 ~ 7182834 (-) True acbd4
TU127372 other downstream 329759 6670319 ~ 6671247 (-) True G86049
XR_006252215.1 other downstream 927574 6064298 ~ 6073432 (-) False LOC122355418
XR_006252216.1 other downstream 946653 6051723 ~ 6054353 (-) False LOC122355418
TU127212 other downstream 993899 5990913 ~ 6007107 (-) True G85930
TU127203 other downstream 1013226 5984989 ~ 5987780 (-) True G85925
TU127438 other upstream 101731 7103880 ~ 7104218 (-) True G86108
TU127575 other upstream 386087 7388236 ~ 7388910 (-) True G86203
TU128131 other upstream 1346013 8348162 ~ 8359980 (-) False cpped1
XR_006252260.1 other upstream 1516086 8518235 ~ 8518365 (-) True LOC122355888
XR_006252259.1 other upstream 1516831 8518980 ~ 8519109 (-) True LOC122355887

Expression Profile