RNA id: unassigned_transcript_1838



Basic Information


Item Value
RNA id unassigned_transcript_1838
length 80
RNA type tRNA
GC content 0.63
exon number 1
gene id trnal-uag_26
representative True

Chromosome Information


Item Value
chromosome id NC_056710.1
NCBI id CM032079.1
chromosome length 20499150
location 4053536 ~ 4053615 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome
species tiger barb
(Puntius tetrazona)

Sequence


ggtagcgtggccgagtggtctaaggcgctggatttaggctccagtctctcaggggcgtgggttcaatcccaccgctgcca

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU126574 lncRNA downstream 92183 3960763 ~ 3961353 (-) True G85435
TU126516 lncRNA downstream 332513 3615842 ~ 3721023 (-) True G85389
TU126494 lncRNA downstream 678585 3373377 ~ 3374951 (-) False G85372
TU126648 lncRNA upstream 64190 4117805 ~ 4175223 (-) True G85487
TU126689 lncRNA upstream 122375 4175990 ~ 4176266 (-) True G85511
TU126694 lncRNA upstream 129967 4183582 ~ 4188337 (-) True G85515
TU126717 lncRNA upstream 167675 4221290 ~ 4221493 (-) False kcnh6b
TU126718 lncRNA upstream 167899 4221514 ~ 4221766 (-) False kcnh6b
XM_043253277.1 mRNA downstream 70979 3974760 ~ 3982557 (-) True lrrc3ca
XM_043253248.1 mRNA downstream 87234 3963315 ~ 3966302 (-) True csf3a
XM_043254134.1 mRNA downstream 121877 3917420 ~ 3931659 (-) True top2a
XM_043254294.1 mRNA downstream 171753 3766347 ~ 3881783 (-) False raraa
XM_043253704.1 mRNA upstream 35095 4088710 ~ 4107244 (-) True ppp1r9bb
XM_043254366.1 mRNA upstream 85445 4139060 ~ 4153875 (-) False p4ha1a
XM_043254364.1 mRNA upstream 85445 4139060 ~ 4153875 (-) False p4ha1a
XM_043254367.1 mRNA upstream 85445 4139060 ~ 4153875 (-) True p4ha1a
XM_043254160.1 mRNA upstream 114024 4167639 ~ 4170922 (-) True dnajc9
unassigned_transcript_1837 other downstream 2067 4051390 ~ 4051469 (-) True trnal-aag_40
unassigned_transcript_1836 other downstream 2232 4051225 ~ 4051304 (-) True trnal-uag_25
unassigned_transcript_1835 other downstream 3225 4050231 ~ 4050311 (-) True trnal-aag_39
unassigned_transcript_1834 other downstream 3387 4050071 ~ 4050149 (-) True trnal-uag_24
unassigned_transcript_1833 other downstream 4544 4048912 ~ 4048992 (-) True trnal-uag_23
unassigned_transcript_1839 other upstream 83 4053698 ~ 4053777 (-) True trnal-aag_41
unassigned_transcript_1840 other upstream 1074 4054689 ~ 4054768 (-) True trnal-uag_27
unassigned_transcript_1841 other upstream 1237 4054852 ~ 4054930 (-) True trnal-aag_42
unassigned_transcript_1842 other upstream 2225 4055840 ~ 4055921 (-) True trnal-uag_28
unassigned_transcript_1843 other upstream 2392 4056007 ~ 4056088 (-) True trnal-aag_43