Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU140073 |
| length | 654 |
| lncRNA type | inter_gene |
| GC content | 0.39 |
| exon number | 2 |
| gene id | G94672 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_056711.1 |
| NCBI id | CM032080.1 |
| chromosome length | 25085836 |
| location | 17970213 ~ 17970976 (-) |
| genome version | ASM1883169v1_2021_tiger_barb_Genome |
| species | tiger barb (Puntius tetrazona) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| XR_006252304.1 | lncRNA | downstream | 59497 | 17903197 ~ 17910716 (-) | False | LOC122356279 |
| XR_006252303.1 | lncRNA | downstream | 59497 | 17905852 ~ 17910716 (-) | True | LOC122356279 |
| XR_006252405.1 | lncRNA | downstream | 70098 | 17892037 ~ 17900115 (-) | True | LOC122356989 |
| TU140004 | lncRNA | downstream | 178323 | 17790884 ~ 17791890 (-) | True | G94619 |
| TU139990 | lncRNA | downstream | 247913 | 17721728 ~ 17722300 (-) | True | G94608 |
| TU140117 | lncRNA | upstream | 136454 | 18107430 ~ 18107801 (-) | True | G94709 |
| TU140119 | lncRNA | upstream | 136862 | 18107838 ~ 18108189 (-) | True | G94711 |
| TU140122 | lncRNA | upstream | 140714 | 18111690 ~ 18113621 (-) | True | G94713 |
| TU140132 | lncRNA | upstream | 148827 | 18119803 ~ 18120616 (-) | True | G94723 |
| TU140138 | lncRNA | upstream | 163469 | 18134445 ~ 18136614 (-) | True | G94728 |
| XM_043255014.1 | mRNA | downstream | 5343 | 17960037 ~ 17964870 (-) | False | rsrp1 |
| XM_043255015.1 | mRNA | downstream | 5343 | 17960959 ~ 17964870 (-) | True | rsrp1 |
| XM_043255705.1 | mRNA | downstream | 116840 | 17800984 ~ 17853373 (-) | False | runx3 |
| XM_043255706.1 | mRNA | downstream | 117027 | 17800984 ~ 17853186 (-) | True | runx3 |
| XM_043255644.1 | mRNA | downstream | 182082 | 17776719 ~ 17788131 (-) | True | chp1 |
| XM_043255013.1 | mRNA | upstream | 1900 | 17972876 ~ 17980109 (-) | True | rhd |
| XM_043254799.1 | mRNA | upstream | 102755 | 18073731 ~ 18080606 (-) | False | fndc5a |
| XM_043254801.1 | mRNA | upstream | 102755 | 18073731 ~ 18080606 (-) | False | fndc5a |
| XM_043254800.1 | mRNA | upstream | 102755 | 18073731 ~ 18080606 (-) | True | fndc5a |
| XM_043256046.1 | mRNA | upstream | 402892 | 18373868 ~ 18380023 (-) | False | LOC122356930 |
| unassigned_transcript_1930 | other | downstream | 250507 | 17719634 ~ 17719706 (-) | True | trnav-aac_26 |
| unassigned_transcript_1929 | other | downstream | 251034 | 17719107 ~ 17719179 (-) | True | trnav-cac_10 |
| unassigned_transcript_1928 | other | downstream | 1522451 | 16447691 ~ 16447762 (-) | True | trnah-gug_23 |
| TU139697 | other | downstream | 1543678 | 16425697 ~ 16426535 (-) | True | G94412 |
| TU139489 | other | downstream | 1677847 | 16290154 ~ 16292366 (-) | False | cisd1 |
| TU140311 | other | upstream | 574605 | 18545581 ~ 18672893 (-) | True | LOC122356088 |
| TU140313 | other | upstream | 574605 | 18545581 ~ 18672893 (-) | False | LOC122356088 |
| TU140314 | other | upstream | 574605 | 18545581 ~ 18672893 (-) | False | LOC122356088 |
| XR_006252356.1 | other | upstream | 1897037 | 19868013 ~ 19907062 (-) | False | disc1 |
| XR_006252430.1 | other | upstream | 2172620 | 20143596 ~ 20143727 (-) | True | LOC122357145 |
