RNA id: TU141230


Basic Information

Item Value
RNA id TU141230
length 1358
lncRNA type inter_gene
GC content 0.40
exon number 2
gene id G95506
representative True

Chromosome Information

Item Value
chromosome id NC_056711.1
NCBI id CM032080.1
chromosome length 25085836
location 20236678 ~ 20238227 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome
species tiger barb
(Puntius tetrazona)

Sequence

aaatctgtaatttaaatttaattttaaatggtaacgctttacaataagttTCATTTAACTACATTAATAAACACGAATTAAGAATGAATaatacttctaaagcatttattaatcttaatgttaatttttacaattaaccaatgcattatgaaaatcacaagttgcatttgttaacatttaagGTGAATAAACGGTGAAATAAATGCGTTGTTGTTCAtgttagtaaatacatttaataaatgacattttaataagtgAATCACCACATTAATACTATTGGAATAGCATTTATCAAttagttaaaatgttataaaattataacacataaaaaaataggcCAATTTAAAAGTCCTTTAGATGCAGCAGTAATACAACCCTAATGAAACCTTGCTGGAAAAAAGTTAAATCTGCAATCATTTTAAGAATATAACACAAGAGAGAAAGGGCACTCTATAAATGTCACAgagaaactatttaaatatgaattattctgACTTGTGTTGGAGTTCATTTAAGGAAGTGTTCAGCGACGATAGAGAGTGTATGTTGAGCTTTCACTCGTTACAGTAATCAgctctgagacacacacacacacacacacacacacacacagagacagacacacacagagacacacacacacacagacagacacacacacaggcacagacacacacagacagacagacacacagacacacacagacagacacacacagacagacagagagacacacagacagacagagagacacacagacagacagacacacacacagacagacagacacacacagacagacacacacagacagacacacacacacacacagagagacacacacagacagacacacacacacacacacacagagagacacacagacagacagacacacacacacacagacagacacacacacacagacagacagacacacacagacagacacacagacagacagacacacagacagacagacacacacacagacagacaggcacacacacacacacacacacacagacacacacacacacacagacagacagacacacacagacagacacacacagacagacacacacagacagacacacacagacagacagagagacacacacacagagacagacagacacacacacacagagacagacagacacacacacacagagacagacagacacacacagacagacacacacagacagacacacacagacagacacacacagacagacacacacagacagacacacacagacagacagagagacacacacacagacacacacacagacagacagacagacagagacagacacacacacagacacacacagacagacagaca

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
XR_006252294.1 lncRNA downstream 95720 20108191 ~ 20140958 (-) True LOC122356209
TU141210 lncRNA downstream 95992 20114726 ~ 20140686 (-) False LOC122356209
TU141188 lncRNA downstream 160741 20075371 ~ 20075937 (-) True G95469
TU141149 lncRNA downstream 315038 19921002 ~ 19921640 (-) False LOC122357123
TU140781 lncRNA downstream 390144 19846301 ~ 19846534 (-) True G95190
TU141232 lncRNA upstream 26499 20264726 ~ 20275256 (-) False LOC122356211
TU141247 lncRNA upstream 276546 20514773 ~ 20515311 (-) True G95519
TU141256 lncRNA upstream 280373 20518600 ~ 20520093 (-) True G95524
TU141285 lncRNA upstream 381820 20620047 ~ 20620719 (-) True G95537
TU141279 lncRNA upstream 383035 20621262 ~ 20623143 (-) True G95535
XM_043255557.1 mRNA downstream 17778 20150458 ~ 20218900 (-) True arid4b
XM_043255630.1 mRNA downstream 91210 20142549 ~ 20145468 (-) True tomm20a
XM_043255693.1 mRNA downstream 132806 20101059 ~ 20103872 (-) True irf2bp2a
XM_043255838.1 mRNA downstream 200205 20027304 ~ 20036473 (-) False LOC122356780
XM_043256232.1 mRNA upstream 7260 20245487 ~ 20264253 (-) False b3galnt2
XM_043256231.1 mRNA upstream 7260 20245487 ~ 20264250 (-) True b3galnt2
XM_043254718.1 mRNA upstream 26558 20264785 ~ 20275386 (-) False LOC122356211
XM_043254719.1 mRNA upstream 26558 20264785 ~ 20275031 (-) True LOC122356211
XM_043254720.1 mRNA upstream 26558 20264785 ~ 20274689 (-) False LOC122356211
XR_006252430.1 other downstream 92951 20143596 ~ 20143727 (-) True LOC122357145
XR_006252356.1 other downstream 329616 19868013 ~ 19907062 (-) False disc1
TU140311 other downstream 1563785 18545581 ~ 18672893 (-) True LOC122356088
TU140313 other downstream 1563785 18545581 ~ 18672893 (-) False LOC122356088
TU140314 other downstream 1563785 18545581 ~ 18672893 (-) False LOC122356088
TU141250 other upstream 241698 20479925 ~ 20486704 (-) True G95520
TU141252 other upstream 243216 20481443 ~ 20486704 (-) False G95520
TU141235 other upstream 250558 20488785 ~ 20492076 (-) True G95510
TU141237 other upstream 255415 20493642 ~ 20496864 (-) True G95511
TU141260 other upstream 331811 20570038 ~ 20571562 (-) True G95526

Expression Profile