RNA id: TU141282



Basic Information


Item Value
RNA id TU141282
length 603
lncRNA type read_through
GC content 0.54
exon number 4
gene id G95535
representative False

Chromosome Information


Item Value
chromosome id NC_056711.1
NCBI id CM032080.1
chromosome length 25085836
location 20621262 ~ 20678269 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome
species tiger barb
(Puntius tetrazona)

Sequence


gtttctgtgtgtgtgtgtgtgtgttcaGTGGGGGAGCTCGTGATGGACGAGTTTGTAGTGCGAGCCGCAGGAAGGACAGCGCTGAGCGTCTCCCTCGTGAAGCCAGAACCAAACCACGGCCGTGTTGTCCTCCTCACCTTCACAAGACGCAGAGAAACAGCTAGGCAGCCCACCAGCCGCTTGTTATTGATGCTGGGAACGATATGAGGGTCGTCTCTGCTTCCAGTGTATTCCTTTGGCTTGAATATGCTGTATGGATCCTGTGAGGCAGATGATAGGTGGTTGAGAACAGAAACCATACACTCAGATCACTGTGTGTTTTACCTGGCCTTTCTTCATGGCCTGCAGGACGCGTCTCTCCAGCCCCGCGGCCTGCTCTTCATCCGTTGGAATACCTGAAAGATAGAAAACACTATCCATAAGACGAATCCTGAATGCATTTTACCTTCGCTGGCCATGGCACGCCGAGGCGTTTTCATTAAAACGCTCCGTCTCGCCGTCAGAGTCAGGCGGCAGGCCCTCAGGAGGACTTTGCTGGCCATGTCGACTTGAAAACTTTCGGTCTTCTGTGCGCGCGCTACTCCGTGAACCAGAGTCGGTGAG

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU141285 lncRNA downstream 543 20620047 ~ 20620719 (-) True G95537
TU141256 lncRNA downstream 101169 20518600 ~ 20520093 (-) True G95524
TU141247 lncRNA downstream 105951 20514773 ~ 20515311 (-) True G95519
TU141232 lncRNA downstream 346006 20264726 ~ 20275256 (-) False LOC122356211
TU141230 lncRNA downstream 383035 20236678 ~ 20238227 (-) True G95506
TU141307 lncRNA upstream 150509 20828778 ~ 20829053 (-) True G95549
TU141397 lncRNA upstream 169028 20847297 ~ 20926743 (-) True G95623
TU141417 lncRNA upstream 298010 20976279 ~ 20976497 (-) True G95635
TU141424 lncRNA upstream 317814 20996083 ~ 20996511 (-) True G95640
TU141425 lncRNA upstream 320771 20999040 ~ 20999265 (-) True G95641
XM_043255900.1 mRNA downstream 4850 20607257 ~ 20616412 (-) True sirt1
XM_043256163.1 mRNA downstream 14756 20598724 ~ 20606506 (-) True cacul1
XM_043255696.1 mRNA downstream 25273 20575578 ~ 20595989 (-) False mypn
XM_043255695.1 mRNA downstream 25276 20572320 ~ 20595986 (-) False mypn
XM_043255989.1 mRNA upstream 266315 20944584 ~ 20946525 (-) True vent
XM_043256148.1 mRNA upstream 269718 20947987 ~ 20949698 (-) True vox
XM_043254782.1 mRNA upstream 277198 20955467 ~ 20997713 (-) True LOC122356249
XM_043255253.1 mRNA upstream 349496 21027765 ~ 21042154 (-) False LOC122356507
XM_043255251.1 mRNA upstream 358716 21036985 ~ 21042123 (-) True LOC122356507
TU141260 other downstream 49700 20570038 ~ 20571562 (-) True G95526
TU141237 other downstream 124398 20493642 ~ 20496864 (-) True G95511
TU141235 other downstream 129186 20488785 ~ 20492076 (-) True G95510
TU141250 other downstream 134558 20479925 ~ 20486704 (-) True G95520
TU141433 other upstream 329203 21007472 ~ 21180217 (-) True G95646
unassigned_transcript_1931 other upstream 735531 21413800 ~ 21413871 (-) True trnag-gcc_70
unassigned_transcript_1932 other upstream 895982 21574251 ~ 21574321 (-) True trnag-gcc_71
unassigned_transcript_1933 other upstream 975343 21653612 ~ 21653681 (-) True trnag-gcc_72
TU141816 other upstream 1460060 22138329 ~ 22143970 (-) False LOC122357128

Expression Profile