RNA id: TU141433


Basic Information

Item Value
RNA id TU141433
length 1700
RNA type TUCP
GC content 0.54
exon number 7
gene id G95646
representative True

Chromosome Information

Item Value
chromosome id NC_056711.1
NCBI id CM032080.1
chromosome length 25085836
location 21007472 ~ 21180217 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome
species tiger barb
(Puntius tetrazona)

Sequence

tttgtaattttttgctgtttttactgggttttttgtaattttttgttgtttttactgttttttgtcttttgttgttgttgttgttgtaatttttagttttgttttttactgtttttttattaaatcgtTTAAAGATGCTATGCAGTGGTTTTATTAACACTATTATCTATTAACACTATTTGTTGTTTATCAAGCTGAGTGCCGTTTCATTCTCGACCCCTCGCTCTTCAAACGCGCCTTCCCCGCATTATCTGCTTATCGGTGTAATCCGAAATGTGTTTTCCGAGGCCAAAACGGCGTGTTTTCTTCCTTCAGCCTTCAGCATCTGCAGCAGACACTGACACGTTCCCCGCTCTCCTAACAGATGATGCTGATAACCCCTGCGCTGGTGTTGTAGTGAGCTGCTCTGCGGCAGCGAgcctctgcctcctccagcACTTTGCCCTTCTCTCTCAATCAGACGGGAGCTGACACGCGTCTGCGCATCTGATGCACATGTCTCACATGCCTTTCTCCGTTTGCAGAACGCGGTGGCCATCGCCTCCATACATTTCCCGCTGGCTGCCCCTCGGTCTGTGGAGAACTCCACCTGTAAGCTGCAGCTGATCGTCTTCCGCAATGGAAAACTCTTTCCGTGCACGGGGAATTCGTCGAATCTCGCGGACGATGGCAAGCGCAGGAGCGTCTCGACACCAGTTGCGTTCACCAAATTAGATGGGTGTAGCCCCGGGAGCCCCGTGCAGCCCGTTACCGTCGCTCTCCGGCACTTCTCGTTGGGTGTAGACCCCACCGCGGCATACTGGGATTTTGACCTGCTGGATGGACACGGCGGCTGGCGCGCGGAAGGCTGCCACATAACGGGCTCCGCGCTCAACACGACCACCATCCACTGCGCGCACCACAACAACCTCGCCGTGCTCATGgatCTGAAGAAGGTGCTGTCGTTCCCTCCGTATCCAGGAGAGTTCCTGCACCCGGTGGTTTACGCCTGTACAGCCGTCATGCTGCTCTGCCTGTTCGCCTCCATCATCACCTACATAGTGCACCACAGcaCCATCCGGATCAGTCGGAAAGGATGGCACATGCTCCTGAACTTCTGCTTCCACACGGCTCTGACGTTCTCGGTGTTCGCCGGAGGCATCAACCGAATCAAACACCCCATCATCTGCCAGGCCgttgGTATCGTCTTGCATTACTCGTCTCTGTCCACGATGCTCTGGGTTGGGCGCCACGGCACGAAACATCTACAAACAGGTGACCAAAAAGCCCCAGCAGCCTCAGGACGGAGACCACGCCCTCCTCACCCCGCCAGGTCACCCATGCTGAGGTTTTATTTAGTGAGTGCCGGAGTTCCCTTCATCATCTGTGGGATCACAGCAGCCATCAACATGGAGAACTACGGCAGCGGAGAGCAGACGCCGTTCTGCTGGATGGCGTGGGAGCCGAGCCTGGGCGCCTTCTACGGTCCCGTGGCCTTCATCGTCCTAGTGACCTGCGTCTACTTCCTGTGCACCTTCATCCAGTTGCGCAAACACCCCGAGCGGAAATACGAGCTGAAAGCGGTGAGAGAAGAACAACAGCGGCTTTCCGATGTCCACCAGGGGGAGCCTGCGAGCGGCCAGTGTCACGGAGGATGCCCGGGTCTCATCAACCCGTCCATGCTGGCTAACGAACACTCGTTTAAAGCCCAGCTGCGGACG

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU141427 lncRNA downstream 3821 21002627 ~ 21003651 (-) True G95643
TU141426 lncRNA downstream 5628 21001337 ~ 21001844 (-) True G95642
TU141425 lncRNA downstream 8207 20999040 ~ 20999265 (-) True G95641
TU141424 lncRNA downstream 10961 20996083 ~ 20996511 (-) True G95640
TU141417 lncRNA downstream 30975 20976279 ~ 20976497 (-) True G95635
TU141539 lncRNA upstream 307297 21487514 ~ 21495153 (-) True G95715
TU141779 lncRNA upstream 694296 21874513 ~ 21874929 (-) True G95899
TU141784 lncRNA upstream 859565 22039782 ~ 22040106 (-) True G95903
TU141782 lncRNA upstream 934479 22114696 ~ 22120442 (-) True G95902
TU141813 lncRNA upstream 955719 22135936 ~ 22136391 (-) True G95922
XM_043254782.1 mRNA downstream 9759 20955467 ~ 20997713 (-) True LOC122356249
XM_043256148.1 mRNA downstream 57774 20947987 ~ 20949698 (-) True vox
XM_043255989.1 mRNA downstream 60947 20944584 ~ 20946525 (-) True vent
XM_043255372.1 mRNA downstream 320552 20662202 ~ 20686920 (-) False blnk
XM_043255370.1 mRNA downstream 320555 20662202 ~ 20686917 (-) False blnk
XM_043255250.1 mRNA upstream 29601 21209818 ~ 21254638 (-) True LOC122356506
XM_043256061.1 mRNA upstream 89133 21269350 ~ 21323003 (-) False LOC122356942
XM_043256060.1 mRNA upstream 89133 21269350 ~ 21323001 (-) True LOC122356942
XM_043254705.1 mRNA upstream 667213 21847430 ~ 21866898 (-) True valopa
XM_043254889.1 mRNA upstream 728141 21908358 ~ 22024610 (-) True LOC122356328
TU141260 other downstream 435910 20570038 ~ 20571562 (-) True G95526
TU141237 other downstream 510608 20493642 ~ 20496864 (-) True G95511
TU141235 other downstream 515396 20488785 ~ 20492076 (-) True G95510
TU141250 other downstream 520768 20479925 ~ 20486704 (-) True G95520
TU141252 other downstream 520768 20481443 ~ 20486704 (-) False G95520
unassigned_transcript_1931 other upstream 233583 21413800 ~ 21413871 (-) True trnag-gcc_70
unassigned_transcript_1932 other upstream 394034 21574251 ~ 21574321 (-) True trnag-gcc_71
unassigned_transcript_1933 other upstream 473395 21653612 ~ 21653681 (-) True trnag-gcc_72
TU141816 other upstream 958112 22138329 ~ 22143970 (-) False LOC122357128
TU141794 other upstream 971525 22151742 ~ 22156824 (-) False tmem254

Expression Profile