RNA id: TU141816



Basic Information


Item Value
RNA id TU141816
length 817
RNA type TUCP
GC content 0.56
exon number 4
gene id LOC122357128
representative False

Chromosome Information


Item Value
chromosome id NC_056711.1
NCBI id CM032080.1
chromosome length 25085836
location 22137388 ~ 22143970 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome
species tiger barb
(Puntius tetrazona)

Sequence


GTCATGGGTTTGGACACGTCTGTCCTGGGTGTCTGGCGTGGTTGATGGAGTCTCGGGCCGTGCTGCCGTAGGAAATAACCATAGCTCCGTAGTCTCGGTACATGCGCAGGCGAGGAGGAGAGCTGTAGGCCGGCATGATGACGAACACCGGGATACGCAGCTCCACCGCGTGATACGCCACCGCCATCGAGAAGTTACAGTCCGTGGCCACGATCACGCCCTTCCTCTGCTGATCCTGCACAGCTCAGGGTGTCTTCTGGATGCTGCTCTGCTGGAGTCTGAAGGCAGCGGCGCTGATGTCCTCGAAGCGGAGGTGGTCAGGGACAGCTTTGGCTGTAGTCTTGCTCTCTCCGCTCTTCTTCGGTGGTTTGGGTGTGGACATTAACTGGAGCTCCGCCGCTTGAGAGACGCTGCCCTCGTGGACCCTCACGTCTCCATTGAGgaggaggaggaggaggctgaggaaGAGTCTGAGGAGCACACACACTACAGCGTGAAGGAGCGTTCTCTGTGATCTGTGGAAGAGCTAGAGATGAAGACGGGTCTGGAGCAGCGGCTCTGTCTGAAGCTCCAGGAGAAGCTGAGGGAGATCTCAGCGAGAGAGCTTTGTGCGTCTCAGGAGTCGAAGGTGAACCGGTGGATGGAGGAAGAGCGGGATGGGATGAAGAACACAGAGGGTCTGCTAAACGCCGGTGAAGCTCAGACTCAGGAGGACACTGAGGAGGTTCTGGAGGCTCTCTAAGGGTTTCAGACACACACTACCCGTCAAACGTTTCTAAAACGTAAGatctttgatgtttttaaaagaagtctcttc

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU141813 lncRNA downstream 1938 22135936 ~ 22136391 (-) True G95922
TU141782 lncRNA downstream 17887 22114696 ~ 22120442 (-) True G95902
TU141784 lncRNA downstream 98223 22039782 ~ 22040106 (-) True G95903
TU141779 lncRNA downstream 263400 21874513 ~ 21874929 (-) True G95899
TU141539 lncRNA downstream 643176 21487514 ~ 21495153 (-) True G95715
TU141834 lncRNA upstream 30356 22174326 ~ 22244477 (-) True G95934
TU141833 lncRNA upstream 84214 22228184 ~ 22230539 (-) True G95933
TU141841 lncRNA upstream 104086 22248056 ~ 22370625 (-) False G95938
TU141836 lncRNA upstream 152371 22296341 ~ 22297227 (-) False G95936
TU141845 lncRNA upstream 159335 22303305 ~ 22303781 (-) True G95941
XM_043255712.1 mRNA downstream 86643 22041455 ~ 22051686 (-) True pwwp2b
XM_043254889.1 mRNA downstream 113719 21908358 ~ 22024610 (-) True LOC122356328
XM_043254705.1 mRNA downstream 271431 21847430 ~ 21866898 (-) True valopa
XM_043256061.1 mRNA downstream 815326 21269350 ~ 21323003 (-) False LOC122356942
XM_043256060.1 mRNA downstream 815328 21269350 ~ 21323001 (-) True LOC122356942
XM_043256219.1 mRNA upstream 8065 22152035 ~ 22156844 (-) False tmem254
XM_043254898.1 mRNA upstream 13695 22157665 ~ 22183174 (-) False srfb
XM_043254899.1 mRNA upstream 13695 22157665 ~ 22183173 (-) True srfb
XM_043254790.1 mRNA upstream 41070 22185040 ~ 22227004 (-) True ptk7b
XM_043255446.1 mRNA upstream 87479 22231449 ~ 22250313 (-) False klc1b
unassigned_transcript_1933 other downstream 484648 21653612 ~ 21653681 (-) True trnag-gcc_72
unassigned_transcript_1932 other downstream 564008 21574251 ~ 21574321 (-) True trnag-gcc_71
unassigned_transcript_1931 other downstream 724458 21413800 ~ 21413871 (-) True trnag-gcc_70
TU141433 other downstream 958112 21007472 ~ 21180217 (-) True G95646
TU141260 other downstream 1566767 20570038 ~ 20571562 (-) True G95526
TU141794 other upstream 7772 22151742 ~ 22156824 (-) False tmem254
TU141795 other upstream 7772 22151742 ~ 22156859 (-) True tmem254
XR_006252351.1 other upstream 88844 22232814 ~ 22250313 (-) False klc1b
TU141832 other upstream 92134 22236104 ~ 22238570 (-) True G95932
TU141837 other upstream 152371 22296341 ~ 22297227 (-) True G95936

Expression Profile