RNA id: XM_043254793.1


Basic Information

Item Value
RNA id XM_043254793.1
length 1286
RNA type mRNA
GC content 0.54
exon number 11
gene id LOC122356262
representative False

Chromosome Information

Item Value
chromosome id NC_056711.1
NCBI id CM032080.1
chromosome length 25085836
location 22371567 ~ 22448011 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome
species tiger barb
(Puntius tetrazona)

Sequence

AAGACGGCTGTGATGAAGGTCTGAGGCTGATGATGGGCAGGAGTCAGTCCCGTGGAGCTCCGCTGCTGTGTGAGGATGATGAGGTTTCCTTTGACCACTTTCAGATTCTCAGAGCCATTGGAAAGGGAAGCTTTGGAAAGGTGTGTATCGTGCAGAAGACAGACTCCAGGAAGATGTACGCCATGAAGTACGTGAACAAGCAGAAATGCATCGAAAGAGATGAAGTCCGAAACGTCCTCCGAGAGCTGCAGGTCATGCGACGACTCCAACATCCGTTCCTCGTCAACCTGTGGTTTTCGTTTCAGGACGAGGAGGATCTCTTCATGGTGGTGGATCTGCTGCTAGGAGGTGATTTACGCTTCCACCTGCAGAAGAAGGTGTGTTTCACCGAGCAGACGGTCAAGCTGTACGTGTGTGAGCTGGTGCTAGCGCTCGACTACCTGCAGAGCTCCAACATCATCCACCGGGACATCAAACCGGACAACATCCTCCTGGACGAGCAagGTCATGCGCATTTAACAGACTTTAACATCGCTACCATAATCAAAGACGGCGAACGAGCCACGGCGTTAGCGGGTACGAAGCCTTACATGGCTCCAGAGATCTTCCAGTCGTTCGTGAGCGGAGGAACCGGTTATGCGTTCGAGGTGGACTGGTGGTCGCTGGGCGTGACCATCTTTGAGGTTCTGCGAAGTTGGaggCCGTACGACATCCACGCCAGTAACTCGGTGGAGTCCCTGCTGCAGCTCTTCAGTACGGTCAGTGTTCAGTACAGCTCATCCTGGCACAAAGACCTCATCTCGCTGCTGAGGAAGTTATTGACCGTGAACCCCGAGCATCGCTTCTGTAGTCTGGCTCAGATGCAGACGGCTCCCTACCTCTCCGATGTCAACTGGGACGACGTTTATGAGAAGAAGATGGAGCCCGGCTTTGTTCCCAATAAAGGTCGTCTGCACTGCGACCCCACCTTTGAGCTGGAGGAGATGATTCTGGAGTCTCGTCCGCTTCATAAGAAGAAGAAACGACTGGCCAAGAACAGATCGAGAGACAACAGCAAAGATTCTCACTTTCAGCACCGGAGCTTCTCCTGGAGCACGGCGAGCTATTTCTGGCGTCTTCCAGCAGGAACAGAGTTCAGAGCTCGACGCGAGCCGCTGCAGCAGGTCACCGAGCTCAGAGCCCGCTCACGAGACGTCTCTCTGTTTTCCTCGCAGGAGAACGAGTATCTTCAGGAGTGCCTTGAAGTTGTCCAGCAGGAGTTCATGATCTTCAACCGTGAAAAGTGA

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU141890 lncRNA downstream 11028 22423119 ~ 22424220 (-) True G95971
TU141841 lncRNA downstream 64623 22248056 ~ 22370625 (-) False G95938
TU141840 lncRNA downstream 64623 22307068 ~ 22370625 (-) True G95938
TU141854 lncRNA downstream 120114 22313656 ~ 22315134 (-) False G95949
TU141845 lncRNA downstream 131467 22303305 ~ 22303781 (-) True G95941
TU141839 lncRNA upstream 17135 22465146 ~ 22471340 (-) True G95937
TU141910 lncRNA upstream 73005 22521016 ~ 22521948 (-) True G95984
TU141911 lncRNA upstream 73944 22521955 ~ 22523449 (-) True G95985
TU141916 lncRNA upstream 173031 22621042 ~ 22621428 (-) True G95990
TU141918 lncRNA upstream 186255 22634266 ~ 22634490 (-) True G95992
XM_043254651.1 mRNA downstream 105956 22326705 ~ 22329292 (-) True ypel5
XM_043254650.1 mRNA downstream 111739 22317240 ~ 22323509 (-) True slc30a10
XM_043255402.1 mRNA downstream 151602 22254179 ~ 22283646 (-) False zmp:0000000755
XM_043255400.1 mRNA downstream 151606 22254179 ~ 22283642 (-) True zmp:0000000755
XM_043255401.1 mRNA downstream 151612 22254179 ~ 22283636 (-) False zmp:0000000755
XM_043254794.1 mRNA upstream 37278 22485289 ~ 22489323 (-) True LOC122356263
XM_043254796.1 mRNA upstream 354707 22802718 ~ 22819457 (-) True LOC122356266
XM_043254876.1 mRNA upstream 686807 23134818 ~ 23136642 (-) True c1d
XM_043254869.1 mRNA upstream 709091 23157102 ~ 23167091 (-) False LOC122356317
XM_043254868.1 mRNA upstream 709091 23157102 ~ 23167091 (-) True LOC122356317
TU141894 other downstream 12379 22420936 ~ 22422869 (-) True G95972
TU141850 other downstream 105988 22326710 ~ 22329260 (-) False ypel5
TU141837 other downstream 138021 22296341 ~ 22297227 (-) True G95936
XR_006252351.1 other downstream 184935 22232814 ~ 22250313 (-) False klc1b
TU141832 other downstream 196678 22236104 ~ 22238570 (-) True G95932
TU141976 other upstream 373970 22821981 ~ 22823259 (-) True G96036
TU141977 other upstream 373970 22821981 ~ 22822514 (-) False G96036
TU142010 other upstream 546652 22994663 ~ 22995599 (-) True G96053
XR_006252429.1 other upstream 1822303 24270314 ~ 24270449 (-) True LOC122357144
TU142459 other upstream 1894850 24342861 ~ 24344630 (-) False borcs7

Expression Profile