RNA id: TU141910



Basic Information


Item Value
RNA id TU141910
length 933
lncRNA type inter_gene
GC content 0.38
exon number 1
gene id G95984
representative True

Chromosome Information


Item Value
chromosome id NC_056711.1
NCBI id CM032080.1
chromosome length 25085836
location 22521016 ~ 22521948 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome
species tiger barb
(Puntius tetrazona)

Sequence


GCAGAGTCACTTTAAAGTCTACATGAAACAGCATTACCTTTACCTCGTTTACCTTCACGGTGTGatgtattttgtgatttttatccCCAAAGGAACTCAAATAAGGAATGTTTAACATAATTTCGTAAATTTAGGTTTCGTGTTAACTTTAAGCATTAGAACTGAATGACAGAGGTTTGGTgttgacttgtttttttgtcttaagcTAGTCTGTATTTCTCTAATattggtgtatgtgtgtgtttcttcatcattCCCACAAAAGCAGGATGTTCAAAGGTGGTAATATTCTCAGGCTATATTTGTAAccactaaaataaatgatgactgagACTTCTTATTGATGTTCTATGAAAGTGCATGGACTGAACAAGTCTGTCACCTTTCTATAGGAATATTTCATGCATACATGTTGCGCTGTTTCCACATCAGTGGCAAATTTcacatgcattttgtgtttaaaatctgCCATTTACTTTGGTTGCTAGATAATGTGTGTGCAGAGCATGCTGGGATATTATTACTCACACTGAGACAAACCAATTGACCAAGTCACCTGCATATTCTTCCTGAGCCCAAGCCCTGCCTGATTTTATCTTGAATTTTAAAGATACGAAATTCTGCCTAAGAAGAGCCTGCCACATTTTCTGATTTAACAATATGACTCTGCTTTGCAGCATTTGTACAGAGAAAtgatttcagtcattttcaCACTGTGCATCAGGTGAGATCAGATAAGAAGTTCCTCTGAAAGCTGTTCAGATTAAGATTCATTTACTGTGAGCTTGACACCTGCAGTCTAGATTGGATGAGGGAATAAAGACAAGTAGGTCTGCATAAGTaaagcgtttgtgtgtgtgtgtgtgtgtgtgtgtgtgagcgcttgtttgtgtgtgcactcggatgggttaaatgcagagcataCATTCCAAG

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU141853 lncRNA downstream 37797 22313656 ~ 22483219 (-) True G95949
TU141839 lncRNA downstream 49676 22465146 ~ 22471340 (-) True G95937
TU141890 lncRNA downstream 96796 22423119 ~ 22424220 (-) True G95971
TU141841 lncRNA downstream 150391 22248056 ~ 22370625 (-) False G95938
TU141911 lncRNA upstream 7 22521955 ~ 22523449 (-) True G95985
TU141916 lncRNA upstream 99094 22621042 ~ 22621428 (-) True G95990
TU141918 lncRNA upstream 112318 22634266 ~ 22634490 (-) True G95992
TU141921 lncRNA upstream 135722 22657670 ~ 22657904 (-) True G95995
TU141923 lncRNA upstream 136719 22658667 ~ 22659312 (-) True G95997
XM_043254794.1 mRNA downstream 31693 22485289 ~ 22489323 (-) True LOC122356263
XM_043254793.1 mRNA downstream 73005 22435248 ~ 22448011 (-) False LOC122356262
XM_043254651.1 mRNA downstream 191724 22326705 ~ 22329292 (-) True ypel5
XM_043254650.1 mRNA downstream 197507 22317240 ~ 22323509 (-) True slc30a10
XM_043255400.1 mRNA downstream 237374 22254179 ~ 22283642 (-) True zmp:0000000755
XM_043254796.1 mRNA upstream 280770 22802718 ~ 22819457 (-) True LOC122356266
XM_043254876.1 mRNA upstream 612870 23134818 ~ 23136642 (-) True c1d
XM_043254869.1 mRNA upstream 635154 23157102 ~ 23167091 (-) False LOC122356317
XM_043254868.1 mRNA upstream 635154 23157102 ~ 23167091 (-) True LOC122356317
XM_043254878.1 mRNA upstream 645925 23167873 ~ 23168903 (-) False mrps6
TU141882 other downstream 77730 22379092 ~ 22443286 (-) False LOC122356262
TU141887 other downstream 82018 22371567 ~ 22438998 (-) True LOC122356262
TU141894 other downstream 98147 22420936 ~ 22422869 (-) True G95972
TU141850 other downstream 191756 22326710 ~ 22329260 (-) False ypel5
TU141837 other downstream 223789 22296341 ~ 22297227 (-) True G95936
TU141976 other upstream 300033 22821981 ~ 22823259 (-) True G96036
TU141977 other upstream 300033 22821981 ~ 22822514 (-) False G96036
TU142010 other upstream 472715 22994663 ~ 22995599 (-) True G96053
XR_006252429.1 other upstream 1748366 24270314 ~ 24270449 (-) True LOC122357144
TU142459 other upstream 1820913 24342861 ~ 24344630 (-) False borcs7

Expression Profile