RNA id: TU141986



Basic Information


Item Value
RNA id TU141986
length 584
lncRNA type inter_gene
GC content 0.36
exon number 1
gene id G96044
representative True

Chromosome Information


Item Value
chromosome id NC_056711.1
NCBI id CM032080.1
chromosome length 25085836
location 22833829 ~ 22834412 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome
species tiger barb
(Puntius tetrazona)

Sequence


catatatatatatatatatatatatatatatatatatatatatatatatatatatatatatatatatgtatgtgtgtatattatatatatatgatttttattcaattgctgcttttgtgtttgcataaaTGATTAGAAGTTATACGTGTGattcatgaaatattaaattaaaaaaacatttacaagtaattcataatttatattagcATGCTCCGTTCTGCTGCACAGCgtgatcttgtgtgtttgcTTAGAAGCCCTTAAAAtcacgacaaaaaaaaaattcatttctcAGTTCATTAGTTCTTTTTGTCTATAACTCAGTCGTGCCATCTAAATGCATCTCTcgctttctttttcatttccgCCGAATCATTCATTCCTATCTATAACGGGGCCCGACAGATGAAGTGCATGTCTCACGAGCTGCTGCAGGAGCCGTTCCTctagtttggggtcagtgaggCTGTGGAAGTACTGCTGCGCCGGGCTGCTCGCTACGACCCGCAGTTTGGCGCTGTTCACGTTGTCCTTTGCCAAGTTCGATAAGCCGATTGTGAAGATCTTTATGTTGTGGCCTTTGGCCT

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU141923 lncRNA downstream 174517 22658667 ~ 22659312 (-) True G95997
TU141921 lncRNA downstream 175925 22657670 ~ 22657904 (-) True G95995
TU141918 lncRNA downstream 199339 22634266 ~ 22634490 (-) True G95992
TU141916 lncRNA downstream 212401 22621042 ~ 22621428 (-) True G95990
TU141911 lncRNA downstream 310380 22521955 ~ 22523449 (-) True G95985
TU142008 lncRNA upstream 159625 22994037 ~ 22994569 (-) False G96053
TU142011 lncRNA upstream 159740 22994152 ~ 22994569 (-) False G96053
TU142018 lncRNA upstream 171867 23006279 ~ 23007463 (-) True G96060
TU142019 lncRNA upstream 182786 23017198 ~ 23029900 (-) True G96061
TU142099 lncRNA upstream 317793 23152205 ~ 23154495 (-) True G96108
XM_043254796.1 mRNA downstream 14372 22802718 ~ 22819457 (-) True LOC122356266
XM_043254794.1 mRNA downstream 344506 22485289 ~ 22489323 (-) True LOC122356263
XM_043254793.1 mRNA downstream 385818 22435248 ~ 22448011 (-) False LOC122356262
XM_043254651.1 mRNA downstream 504537 22326705 ~ 22329292 (-) True ypel5
XM_043254650.1 mRNA downstream 510320 22317240 ~ 22323509 (-) True slc30a10
XM_043254876.1 mRNA upstream 300406 23134818 ~ 23136642 (-) True c1d
XM_043254869.1 mRNA upstream 322690 23157102 ~ 23167091 (-) False LOC122356317
XM_043254868.1 mRNA upstream 322690 23157102 ~ 23167091 (-) True LOC122356317
XM_043254878.1 mRNA upstream 333461 23167873 ~ 23168903 (-) False mrps6
XM_043254877.1 mRNA upstream 333461 23167873 ~ 23168902 (-) True mrps6
TU141976 other downstream 10570 22821981 ~ 22823259 (-) True G96036
TU141977 other downstream 11315 22821981 ~ 22822514 (-) False G96036
TU141882 other downstream 390543 22379092 ~ 22443286 (-) False LOC122356262
TU141887 other downstream 394831 22371567 ~ 22438998 (-) True LOC122356262
TU141894 other downstream 410960 22420936 ~ 22422869 (-) True G95972
TU142010 other upstream 160251 22994663 ~ 22995599 (-) True G96053
XR_006252429.1 other upstream 1435902 24270314 ~ 24270449 (-) True LOC122357144
TU142459 other upstream 1508449 24342861 ~ 24344630 (-) False borcs7
TU142467 other upstream 1564711 24399123 ~ 24403644 (-) False fgf8a

Expression Profile