RNA id: TU142011



Basic Information


Item Value
RNA id TU142011
length 418
lncRNA type inter_gene
GC content 0.56
exon number 1
gene id G96053
representative False

Chromosome Information


Item Value
chromosome id NC_056711.1
NCBI id CM032080.1
chromosome length 25085836
location 22994037 ~ 22995599 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome
species tiger barb
(Puntius tetrazona)

Sequence


TTTCATAGAGGCGGCGATAGcgctcttcctttttctctttgtttcctccgttctcttgcgcttaaaaactgcccgcattctccaccacttgtggcgaggcagaggaagcacaagagaaacgggtgcagtgaaaacccccggagggtgtatttattagacaatacacagaaggtgagcggtgagtccgtgcgaggagtgcggcggtgagtccgggggtggtgtagcggtgaatccggtgagtgcagcggtgagtcgtctcggtgtttcccgtgcttagtaccgtgagggagtccactgtgaggtagtaggggaagtagctcaggcaggcccgtcacgttgtagcttctgggagacaaagaaagagacaacaggttagcttgcgtttccggagtctcgtggctccctgaagccgtcgcct

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU141986 lncRNA downstream 159740 22833829 ~ 22834412 (-) True G96044
TU141923 lncRNA downstream 334840 22658667 ~ 22659312 (-) True G95997
TU141921 lncRNA downstream 336248 22657670 ~ 22657904 (-) True G95995
TU141918 lncRNA downstream 359662 22634266 ~ 22634490 (-) True G95992
TU141916 lncRNA downstream 372724 22621042 ~ 22621428 (-) True G95990
TU142018 lncRNA upstream 11710 23006279 ~ 23007463 (-) True G96060
TU142019 lncRNA upstream 22629 23017198 ~ 23029900 (-) True G96061
TU142099 lncRNA upstream 157636 23152205 ~ 23154495 (-) True G96108
TU142100 lncRNA upstream 157636 23152205 ~ 23154495 (-) False G96108
TU142128 lncRNA upstream 182233 23176802 ~ 23178096 (-) True G96117
XM_043254796.1 mRNA downstream 174695 22802718 ~ 22819457 (-) True LOC122356266
XM_043254794.1 mRNA downstream 504829 22485289 ~ 22489323 (-) True LOC122356263
XM_043254793.1 mRNA downstream 546141 22435248 ~ 22448011 (-) False LOC122356262
XM_043254651.1 mRNA downstream 664860 22326705 ~ 22329292 (-) True ypel5
XM_043254650.1 mRNA downstream 670643 22317240 ~ 22323509 (-) True slc30a10
XM_043254876.1 mRNA upstream 140249 23134818 ~ 23136642 (-) True c1d
XM_043254869.1 mRNA upstream 162533 23157102 ~ 23167091 (-) False LOC122356317
XM_043254868.1 mRNA upstream 162533 23157102 ~ 23167091 (-) True LOC122356317
XM_043254878.1 mRNA upstream 173304 23167873 ~ 23168903 (-) False mrps6
XM_043254877.1 mRNA upstream 173304 23167873 ~ 23168902 (-) True mrps6
TU141976 other downstream 170893 22821981 ~ 22823259 (-) True G96036
TU141977 other downstream 171638 22821981 ~ 22822514 (-) False G96036
TU141882 other downstream 550866 22379092 ~ 22443286 (-) False LOC122356262
TU141887 other downstream 555154 22371567 ~ 22438998 (-) True LOC122356262
TU141894 other downstream 571283 22420936 ~ 22422869 (-) True G95972
TU142010 other upstream 94 22994663 ~ 22995599 (-) True G96053
XR_006252429.1 other upstream 1275745 24270314 ~ 24270449 (-) True LOC122357144
TU142459 other upstream 1348292 24342861 ~ 24344630 (-) False borcs7
TU142467 other upstream 1404554 24399123 ~ 24403644 (-) False fgf8a

Expression Profile