RNA id: TU142552


Basic Information

Item Value
RNA id TU142552
length 340
lncRNA type sense_over
GC content 0.57
exon number 3
gene id G96415
representative False

Chromosome Information

Item Value
chromosome id NC_056711.1
NCBI id CM032080.1
chromosome length 25085836
location 24630553 ~ 24675946 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome
species tiger barb
(Puntius tetrazona)

Sequence

ATGGGTTTTTCCTCTTGAGCATGGCCTCATCCTTTGCCTCTTCCTCCCTCTGCCGAATCATCACAGCCATGATAATTTTCCTCTCCTCCTCGGTGAGGTGACTGAGGTCCGGTAGATCGGGCATGGAGCTCTGCGTTGTGGGTGGGCGAGGGCCGCCGCGGGGCCCCACCGAGGCGGACATATTTTACCCCTGTAAGATCGGTGCACAATCCCAGCTATGTAAACCGCTATTCAGGACATAGTCCGATGGCTTATCTGCGGTTGTCGCGAGCGTGGCGAACCGTTCATCGTTGCGGCGGGCACCCACGGTTGTGCTTCTCTTCCTAACATGGCTGAATGA

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU142546 lncRNA downstream 25049 24606130 ~ 24606376 (-) True G96411
TU142461 lncRNA downstream 286795 24342749 ~ 24344630 (-) True borcs7
TU142460 lncRNA downstream 286795 24342861 ~ 24344630 (-) False borcs7
TU142446 lncRNA downstream 348808 24274695 ~ 24282617 (-) True G96329
TU142371 lncRNA downstream 366508 24264668 ~ 24264917 (-) True G96303
TU142578 lncRNA upstream 34798 24710744 ~ 24713458 (-) True G96435
TU142582 lncRNA upstream 38273 24714219 ~ 24716962 (-) True G96436
XM_043254739.1 mRNA downstream 10992 24603688 ~ 24620433 (-) True b3gat2
XM_043255913.1 mRNA downstream 190092 24430020 ~ 24441333 (-) True slc2a15a
XM_043254715.1 mRNA downstream 226710 24399126 ~ 24404715 (-) True fgf8a
XM_043255809.1 mRNA downstream 237538 24367927 ~ 24393887 (-) True fbxw4
XM_043255383.1 mRNA downstream 273184 24350847 ~ 24358241 (-) True wbp1la
XM_043254579.1 mRNA upstream 166324 24842270 ~ 24845635 (-) True cgasa
XM_043255511.1 mRNA upstream 170503 24846449 ~ 24851300 (-) True eef1a1a
XM_043255512.1 mRNA upstream 170503 24846449 ~ 24851238 (-) False eef1a1a
XM_043255513.1 mRNA upstream 170503 24846449 ~ 24851217 (-) False eef1a1a
XM_043255516.1 mRNA upstream 175457 24851403 ~ 24856234 (-) False slc17a5
TU142467 other downstream 227781 24399123 ~ 24403644 (-) False fgf8a
TU142459 other downstream 286795 24342861 ~ 24344630 (-) False borcs7
XR_006252429.1 other downstream 360976 24270314 ~ 24270449 (-) True LOC122357144
TU142010 other downstream 1635826 22994663 ~ 22995599 (-) True G96053
TU141977 other downstream 1808911 22821981 ~ 22822514 (-) False G96036

Expression Profile