RNA id: XM_043254650.1


Basic Information

Item Value
RNA id XM_043254650.1
length 2599
RNA type mRNA
GC content 0.51
exon number 4
gene id slc30a10
representative True

Chromosome Information

Item Value
chromosome id NC_056711.1
NCBI id CM032080.1
chromosome length 25085836
location 22317240 ~ 22323509 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome
species tiger barb
(Puntius tetrazona)

Sequence

tatataatacgatatttatataattcttctccctcagattccaggtTTTCTAATAGTCGTATCTCAGATATGGTCTGATCAGAAGAAACCAGGCATCGATGGAGAGATGGTTTCTTCAgcttcagatgatgtataaatctcctTCCGACGCGTGTTGCTCCAGGGTGTTTATAAAAACGagactaatttatttattcgtttatatatatattttaattgcattcatttatttgaacgCGTTTCGCTGGAGGACTGGAGGACGTGGTGACATCAGTGACCTGTCTTCAGTTGTTTTCTTCACCTGTGCTGTGCTGCTTTAAACAGATCCTCTGGGTTTTGATTTTCCAGCAAACACCAAACCAACGAAAAACACGTGTGtcgtaaaagaaataaagattgCGAATTTTCTCAGTTGTCTGAGGACACGAGGAGAAACAAACCTTGACTATCAGGATGCGAATCAGCTCGTATAGAGTTAGATAGGAGCGCTTGTTTATGATGGAGATGAAAGCCTATCTTATCCGGCGGGGCGTGCCAGAGGCTGTTTAATGTGTGACAGCGTTTACAGCGCGCGCTGGATAAATAACCCCGCTGACCTGCATggaactaactaactaaccaaCCCAGTCAGCAGAAAAAACCAGCTGGATGACTGTTCAAAGGTGACAATGACAAGAATCCGCTGAGGAGGAGACGCGCGCACAATCGCCAGAGACCTCAAGGCAAGCGGCGCGGCGCGTCACCATCGCGTGGAAAAGTGCCAACTCATGATCGCCAACGTGAGACAGAAGGTGAAGAGCAGAGACAGGAGGAGGTGAAGAGCAGAGAGACGGACGGGCAGGTGAGCATCTCtccgcacgcacgcacgcacgcgatCATGGGGCGCTACAGCGGCAAGACGTGCCGCCTGATCCTGATGCTCGTCATCACCGTCATCTTCTTCGTGGCGGAGATCGTGGCGGGGTACATGGGCAACTCCATCGCGCTGGTGTCGGACTCCTTCAACATGCTGTCGGACATTCTGTCGCTGTGCGTCGGGCTGACGGCGGCCCGGGTGTCGCGGCGCGCGAGCTCGGGGCGCTTCACGTACGGCATGGGCCGCGCGGAGGTGGTGGGCGCGCTGGCCAACGCCGTGTTCCTCGCCGCGCTCTGCTTCTCCGTGTCCATGGAGTCTCTGAAGAGGCTCGCCATGCCGCAGGCCATCGACGACCCGCCGCTGGTGCTGATCGTGGGCTCGCTCGGGCTCGCGGTGAACGTGGTCGGGCTGCTCATCTTCCAGGACTGCAGCAGCTGCCGGCGCGCGACGCGGAAGAACGACGCCCCTGTGCCGCGCGAGGCGGAGGAGGACGCGGCGGCGGCGGAGGAAGAAACAGGCctgcaggagaagaagaagccTGAGAGCGACGGGCCTCCGCTAAACATCCGCGgTGTACTGCTTCATGTTCTGAACGACGCGCTGGGCtcggtggtggtggtggtggccTCGGCTCTGTTCTACGTGTGGCCCCTGGCCCCTGAGAGCCCGTGTAACTGGCAGTGTTACGTGGACCCCAGTCTGACGCTGGTCATGGTGGCCATCATCATGTCGTCAGCCGCTCCTCTGGTCAAAGAAACGACGGGGATCCTGCTGCAGATGAGTCCTCCGGACCTGCAGCTCAGCTCTGTCTtggaGAGTGTGTGTAAGCTCCCGGGCGTGGCGAGCGTTCACGAGGCTCACGTCTGGGAGTTATCTAAAGGACGAAACGTGGCCTCGCTGCACGTGAAGGTGAGCGCTGACCTGCAGGATTCGACCCTTCAGACTCAGATCCAGCAGCTGTTCCAGCGCGCCGGGGTCCACAGCGTCACGGTTCAGCTGGAGCGAGCCGACGTAGAGATGTCCTGCTGTCCTCCGGCCTCCAGAGACGTGACCGTCGACATGCTGCCCGAGAAAGAGAAGCAGATATCAGctaaacacacagagagcacCAAGTTCTGAAGGACTGgaacacagaacaaacagacCTGGTTTTATTCCTCCTCACGACTGTGCCTCGCTGCCCTTTAAGACTCCAGCTAATGATTCCTAGTAATTGCACTCGGTTAGTTTGAGACGCGAGTTTGACGGGACCCAGATCAACAGTCGAATTATTCAGCAGCTTATTTATTGCTCTGAAAGAGAGACATGTCCAGCTCATATTTCAGCccaaaataacagaataaaaaaacacacaaatcaagCCAAAGTCTCACGAGTGTGTAAAGAATGTAAACATGAAGATAGTATTTGCTGTAGTGCCTTTAATGCTTACGCTGATGTATGTAATAAATAGTAATCTATTACagtaatatgcaaaatattttttaaattagttccttttgattttggggtgaaatttAACCTGGACATAGTTTCAAGAGATTTGTTCTGATAGCGTGTTTGCATTCCTTGCTGTTATTTATGACATTTTGCTCTTAATGATCTTTATAACTTGCTAATTCAGGGAAATATGAttagttgttgttgtgtgtgagtgtgtgtgtgtgtgtgtgtgtttgaaagacAATCAAATGTACTTCAAAACTGTATACACTTATATTAAACATTCTGGTTGAAATCAAA

Function

GO:

id name namespace
GO:0055085 transmembrane transport biological_process
GO:0006812 cation transport biological_process
GO:0016021 integral component of membrane cellular_component
GO:0008324 cation transmembrane transporter activity molecular_function

KEGG:

id description
K16264 czcD, zitB; cobalt-zinc-cadmium efflux system protein

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU141854 lncRNA downstream 2106 22313656 ~ 22315134 (-) False G95949
TU141845 lncRNA downstream 13459 22303305 ~ 22303781 (-) True G95941
TU141836 lncRNA downstream 20013 22296341 ~ 22297227 (-) False G95936
TU141834 lncRNA downstream 72763 22174326 ~ 22244477 (-) True G95934
TU141833 lncRNA downstream 86701 22228184 ~ 22230539 (-) True G95933
TU141890 lncRNA upstream 99610 22423119 ~ 22424220 (-) True G95971
TU141839 lncRNA upstream 141637 22465146 ~ 22471340 (-) True G95937
TU141910 lncRNA upstream 197507 22521016 ~ 22521948 (-) True G95984
TU141911 lncRNA upstream 198446 22521955 ~ 22523449 (-) True G95985
TU141916 lncRNA upstream 297533 22621042 ~ 22621428 (-) True G95990
XM_043255402.1 mRNA downstream 33594 22254179 ~ 22283646 (-) False zmp:0000000755
XM_043255400.1 mRNA downstream 33598 22254179 ~ 22283642 (-) True zmp:0000000755
XM_043255401.1 mRNA downstream 33604 22254179 ~ 22283636 (-) False zmp:0000000755
XM_043255445.1 mRNA downstream 66927 22231449 ~ 22250313 (-) False klc1b
XM_043254651.1 mRNA upstream 3196 22326705 ~ 22329292 (-) True ypel5
XM_043254793.1 mRNA upstream 111739 22435248 ~ 22448011 (-) False LOC122356262
XM_043254794.1 mRNA upstream 161780 22485289 ~ 22489323 (-) True LOC122356263
XM_043254796.1 mRNA upstream 479209 22802718 ~ 22819457 (-) True LOC122356266
XM_043254876.1 mRNA upstream 811309 23134818 ~ 23136642 (-) True c1d
TU141837 other downstream 20013 22296341 ~ 22297227 (-) True G95936
XR_006252351.1 other downstream 66927 22232814 ~ 22250313 (-) False klc1b
TU141832 other downstream 78670 22236104 ~ 22238570 (-) True G95932
TU141795 other downstream 160381 22151742 ~ 22156859 (-) True tmem254
TU141794 other downstream 160416 22151742 ~ 22156824 (-) False tmem254
TU141850 other upstream 3201 22326710 ~ 22329260 (-) False ypel5
TU141887 other upstream 48058 22371567 ~ 22438998 (-) True LOC122356262
TU141882 other upstream 55583 22379092 ~ 22443286 (-) False LOC122356262
TU141894 other upstream 97427 22420936 ~ 22422869 (-) True G95972
TU141976 other upstream 498472 22821981 ~ 22823259 (-) True G96036

Expression Profile