Gene
RNA
| Item | Value |
|---|---|
| RNA id | XM_043254672.1 |
| length | 1384 |
| RNA type | mRNA |
| GC content | 0.43 |
| exon number | 10 |
| gene id | LOC122356174 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_056711.1 |
| NCBI id | CM032080.1 |
| chromosome length | 25085836 |
| location | 24298935 ~ 24302415 (-) |
| genome version | ASM1883169v1_2021_tiger_barb_Genome |
| species | tiger barb (Puntius tetrazona) |
| id | name | namespace |
|---|---|---|
| GO:0006351 | transcription, DNA-templated | biological_process |
| GO:0005666 | RNA polymerase III complex | cellular_component |
| GO:0005736 | RNA polymerase I complex | cellular_component |
| GO:0003677 | DNA binding | molecular_function |
| GO:0046983 | protein dimerization activity | molecular_function |
| GO:0001054 | RNA polymerase I activity | molecular_function |
| GO:0001056 | RNA polymerase III activity | molecular_function |
| id | description |
|---|---|
| K03027 | RPC40, POLR1C; DNA-directed RNA polymerases I and III subunit RPAC1 |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU142446 | lncRNA | downstream | 16318 | 24274695 ~ 24282617 (-) | True | G96329 |
| TU142371 | lncRNA | downstream | 34018 | 24264668 ~ 24264917 (-) | True | G96303 |
| TU142369 | lncRNA | downstream | 48180 | 24250433 ~ 24250755 (-) | True | G96301 |
| TU142361 | lncRNA | downstream | 191117 | 24107433 ~ 24107818 (-) | True | G96295 |
| TU142347 | lncRNA | downstream | 228447 | 24070160 ~ 24070488 (-) | True | G96286 |
| TU142461 | lncRNA | upstream | 40334 | 24342749 ~ 24344630 (-) | True | borcs7 |
| TU142460 | lncRNA | upstream | 40446 | 24342861 ~ 24344630 (-) | False | borcs7 |
| TU142546 | lncRNA | upstream | 303715 | 24606130 ~ 24606376 (-) | True | G96411 |
| TU142551 | lncRNA | upstream | 328138 | 24630553 ~ 24674087 (-) | True | G96415 |
| TU142552 | lncRNA | upstream | 329010 | 24631425 ~ 24675946 (-) | False | G96415 |
| XM_043255748.1 | mRNA | downstream | 241031 | 24043636 ~ 24057904 (-) | True | angpt2a |
| XM_043255964.1 | mRNA | downstream | 303342 | 23633716 ~ 23995593 (-) | True | csmd1a |
| XM_043254854.1 | mRNA | downstream | 779281 | 23513815 ~ 23519654 (-) | False | rnaset2 |
| XM_043254853.1 | mRNA | downstream | 779282 | 23513815 ~ 23519653 (-) | True | rnaset2 |
| XM_043254855.1 | mRNA | downstream | 779891 | 23513815 ~ 23519044 (-) | False | rnaset2 |
| XM_043254701.1 | mRNA | upstream | 8612 | 24311027 ~ 24313946 (-) | True | inaa |
| XM_043255979.1 | mRNA | upstream | 25450 | 24327865 ~ 24341452 (-) | False | cnnm2a |
| XM_043255978.1 | mRNA | upstream | 25450 | 24327865 ~ 24341447 (-) | True | cnnm2a |
| XM_043255981.1 | mRNA | upstream | 40445 | 24342860 ~ 24344657 (-) | False | borcs7 |
| XM_043255980.1 | mRNA | upstream | 40445 | 24342860 ~ 24344657 (-) | False | borcs7 |
| XR_006252429.1 | other | downstream | 28486 | 24270314 ~ 24270449 (-) | True | LOC122357144 |
| TU142010 | other | downstream | 1303336 | 22994663 ~ 22995599 (-) | True | G96053 |
| TU141976 | other | downstream | 1475676 | 22821981 ~ 22823259 (-) | True | G96036 |
| TU141977 | other | downstream | 1476421 | 22821981 ~ 22822514 (-) | False | G96036 |
| TU141882 | other | downstream | 1855649 | 22379092 ~ 22443286 (-) | False | LOC122356262 |
| TU142459 | other | upstream | 40446 | 24342861 ~ 24344630 (-) | False | borcs7 |
| TU142467 | other | upstream | 96708 | 24399123 ~ 24403644 (-) | False | fgf8a |
