RNA id: XM_043254674.1


Basic Information

Item Value
RNA id XM_043254674.1
length 1611
RNA type mRNA
GC content 0.41
exon number 4
gene id si:dkey-187a12.4
representative True

Chromosome Information

Item Value
chromosome id NC_056711.1
NCBI id CM032080.1
chromosome length 25085836
location 24888115 ~ 24890861 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome
species tiger barb
(Puntius tetrazona)

Sequence

CGTGCGCTGGCTGGGGACAGTTTGATAACCATTTCCGCCTATTTCTCGTACATATCGCAGTGTTTATTAAGAGATGCATGTTAAGGCATTAAATTTTGCAAGTGTGTAAGTACATCCATATAAATGGACCCAAACAGTGTCAGTCGCGTTAACTGGGCCATAAACCGCCGGGCGGAGGGTTTAGTAAGTAAACACATGGCAGACATGGCACAGAGACGCTCAGCGGTGTCTGAAGAGGATATGCACCCTCTGCCAGGAGACTTGAGCAGAAGCTCAGAAGACATATCTGGGCGGGCCGAGGTGAATTTCAGCGCGGATTCACAGTCCTACAATCCTGCAGGAGTGGCGGGAAAGTTAATGCGCGAGGATGCGTCTTCAACATCAGAGGCAGCGGCCCACAGACAGATCATATCGCTCCTTATTGAGATCAAGGAGGAGCAGCAGAGGCAGTGGGAAGTTTTGAAAGACCTGCAGGCCAGGATTCATGGACAGGTGTGTGAAGAGGAGGACGAGCCGCTTGACGTAGATCTGCCACTGCGAACAATGGAACAGCTTGACGAAACGGAGCAACATTTAGAGGATACTGAAGCTCAGAAGAGAATGGTGTCACACCTCTCACGGATGGGCGGAGCGACGGTAGATGATGCGGTCCGGCGTCTTATGCATGCTGTTCTCTCTTTCAGTGTTGGATCAGAGCTCAACTGGGTTGGCAGAGGACAGAAAAGGAGCTTCAGAAACACCAGACTGCAGGGTGTTCTGTTTCGTGCCTTGAAAAGGACACCTGTAGGAAAGGAGGCCACGCACCACCAGTTCGCTGATGTAGTGAAGAAATGGTTGCGGTTTGCCCCTTTCCGACAAAGAGGAAGTGGACGAAGACCGCATTGGAAACCTGTTGAGTTCATCTGTCCCAAATATGACAGTACTGTGGATGATCATAACCAGCTTAACCATAACCAGCTGGATTCTGGGGAGATTCAGGTGACAATATAATTACACTAAGTGTTATATGACTAAATGTCCAAAGACAAGTAAAGCGAAATCAGTGAATGAAGAAATGACAAGAGTGTGAAGGATtggcttttaaaatgtatttttttgtcatattacattctattataatatttgcattgctTTCTATAAGTTAAAATACACTATTGTTACGAGAATAATGTGCAGATTTTCACATTACAACATTAATCTTTAAAACCTAATGggcaaatgtaaataattctGTTATAATGGTTATTTTACCTgtacaattgtttttttattgtattgtaaaatgttttgtttttttgtttaaattttacacATTGCAATACATCTcgcaaaatgtaaatttaaaaatgctttgtgtGGTTTTGTGCCATTATGTTATGACGATAAATCGACTTCAGAGTTAAGAATTTCAAACATTAAAGAGTTCATAAGTGTcagaaaatgtcagaaaaaaaattctcacaTGTAATTTAATCACACTTCTCAATAATATACCTAAATACACTTACTCACTTGGTATCTTTGTTAATGTGAACCATTTTACAACAGTTTTCTAAGAACTCTTGCTTCCTggcatatataaaaacacattaaaaacaatttatccATAAA

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU142582 lncRNA downstream 171153 24714219 ~ 24716962 (-) True G96436
TU142578 lncRNA downstream 174657 24710744 ~ 24713458 (-) True G96435
TU142552 lncRNA downstream 212169 24631425 ~ 24675946 (-) False G96415
XM_043255301.1 mRNA downstream 793 24857219 ~ 24887322 (-) False rin2a
XM_043255303.1 mRNA downstream 793 24857219 ~ 24887322 (-) False rin2a
XM_043255299.1 mRNA downstream 793 24857219 ~ 24887322 (-) False rin2a
XM_043255302.1 mRNA downstream 793 24857219 ~ 24887322 (-) True rin2a
XM_043255300.1 mRNA downstream 793 24857219 ~ 24887322 (-) False rin2a
XM_043256104.1 mRNA upstream 1092 24891953 ~ 24951267 (-) True slc24a3
XM_043255976.1 mRNA upstream 73993 24964854 ~ 24966345 (-) True soul2
TU142467 other downstream 484471 24399123 ~ 24403644 (-) False fgf8a
TU142459 other downstream 543485 24342861 ~ 24344630 (-) False borcs7
XR_006252429.1 other downstream 617666 24270314 ~ 24270449 (-) True LOC122357144
TU142010 other downstream 1892516 22994663 ~ 22995599 (-) True G96053
TU141977 other downstream 2065601 22821981 ~ 22822514 (-) False G96036

Expression Profile