RNA id: XM_043254780.1


Basic Information

Item Value
RNA id XM_043254780.1
length 4780
RNA type mRNA
GC content 0.49
exon number 30
gene id eif2ak2
representative True

Chromosome Information

Item Value
chromosome id NC_056711.1
NCBI id CM032080.1
chromosome length 25085836
location 20521647 ~ 20542635 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome
species tiger barb
(Puntius tetrazona)

Sequence

AGCTTTTTGGCAACTGCAGTACTTTTTTTGAAGTGGGCGTGGCTTAGTAGGAACACGCTAGGATTTTGATTGGCCGATGCTCGGCGATGACGTTGAATCGCGGAAACCGAAACTTAAGCAATCCTCACGTTGCGGAGAAAAGAAAGCGAGCTCGCCTCCGGGATCGACGTCGCTTTAAACTCACACTGCTAGTACCGTgttaagtttattaaaaatattaaaaaaataaaaacacggCGAGGCGTTTTTATTAACGGTCGTCCGCTGACTGCGTGACGTCCTGCGTGCTGACGTCATCAGCGTGAACGCCCGGCGATCTTCTGCCAccgtttttagtttgttttgttttccttagCTGTGCAATGGACTCTCTGTTGGCGAATTATATAGCTCAGCTCAACGTGTACCAGCAGAAGACGCAGTGCTCTGTGGAGTATGAGGAGGGATCCACTGATGGACCGAGTCACGATAAGACGTTCGCTATGAGGGCTGTTGTTAATGGACAGCGGTATCCTGAGGGCACTGGGAAATCCAAGAAAGAGGCCAAGCTAAATGCTGCTAAGAACGCCCTTAATGGCATACACGACAGTCAGAATATTGCACCTACCGTATCGAATTATGTTAGCTGGCTTAATGAATATTCACAAAAGAAGAAGTTGTCTTTCAAGCCTCGCGAGTCCACTAAGATGAATCCCGGAAACGTTACTCAGTTGAGCACGTACGTTTGTAAGTATATTTGTGGTGATAAAGTGTATCCCGAGGCTTTGGGAAAAAATAAGAGGGACGCGAAAGAAGCAGCGGCGAAGTGCGTTTATGAAGAGCTGCTCAAAACACAGGATGCAGAGGTCTTCGATGACGGCAGCAATCGAacgcagaggtcagaggtcgcgTCTCGTAGCGCCAGCCTGGACCGCTTCAGTTCGAGTTTTGCCGATGAATCTCGGAGCACCACGCCTGACAGCAACTACATAGCGCAGCTCAATCACTACTGCCAGAAGCATAAACGCGTGCTTGATTTCAAACTAGTGGACAAGAGAGGCCCCGCTCACAGCCCCGAGTTCGTGTACAAAGCTGTCCTAAACAAGAAGGAATACCCCGAAGGACGAGGGAAGAGCTCGAAAGAGGCGAAGCAGCAGGCCGCTCGGCACGCTTGGAACGAAATTAACGATCGCTCTGGATGGACCGCACAGAGCTCTGAAGACGAAAGCCCCTCGCAAGCTGAAGAGGCGAGTAATACTCCGGATGCTCAACACTCCTCTGAAACTCCCAGCTCAAGTTCTTCTGTCGTCTTCAAGAACTCATCTGCCGCCGGTCCTCCTCTGGTCGCAAGTCCTGGTAAGAGTGCACTGGATGTGAAGCCGAAAATAAAattagCGGCAAATTTTAATCTGTCACCAAATGGCCTGGCCGGGAGTAGAGAGGTATTGTTTACCAGTAACGGGGAAGGAAAcgagtacaaaaaaaatgtatttgtgcgccgatttgtttattgtGAAAGCCGCCTAGAGGTCAGGCGTCCGAGCCAAGCGGCGAAGTCGAGGTTTTTAGAAGACTTCGACTCGATAAGCGCGGTCGGCAAAGGTGGCCGGCGCCGCGTCTTCAAGGCAAGGCGGATATACGAGAACACGTACTACGCGGTGAAGATCGTGAAGAGCACCAAAAAAGCTCGCCGCGAGGTCGGCGCTTTGGCGAAGTTCAACAACCCCAACATCGTCCGCTACTACGTGCTGGGAGGAGGATCGGCGTACAGACACGACTCCTCAGACAGCTACACGTCACGTCTCTCTGTCCCTTGCAGCTCTGGCAGCGACCCGGGGACCAAGTTCCTCTACATCCAGATGGAGTTCTGCGAGGGAGACACGCTTCGGGCCTGGATCGACCGGAAAAACTCCCCGAATGCTATTAACCCAGAGAGGAGGACGGAGGCGGCGCGGATCCACAGGCAGGTGCTGGAGGCCGTGGAGTACATCCACAAACAAGACTTGATCCACAGAGACCTGAAGCCTTTGAACATAATGTTCAGCAGTGACGGGAAAGTAAAGGTTGGAGACTTCGGCCTCGTGACCGCGGCAGAAAATGAAAACGATGAGCAACTGCTGGAACGCACTAAAAGGACAGGGACCCGTGTTTACATGAGCCCGGAGCAGGCCAATCAGACATCGTACGACAGAAAGGTGGATATATACGCTCTGGGCCTCATTTACTTTGAACTCATCTGGAATCTCTTCACGTCACATGAGAAGAAAAAGATTTGGGACGATATAAGAAGAAGGGATTTTCCTCCACAGTTCAGCAAGAATTTTAACTTGGAGCACAAGCTCATAGCCCGGATGCTGAGTCCCAGTCCTGAAGAGAGACCAGACGCCTCCGAGCTGATCCGAGAGCTGGACCGGCACGCTGACATCCTGAGCGCCGCCGATAAAGACACCCGGACGGTTtttaaaaaaaacctctctaaCCGAAGCCAAATGTCTGAAATGGAGAGAAAGATCTGTGATTTCTTGAGGGAAAACGGCAGAAGCAAGCCGCAGGCGATCTCTATCGAACTCGGAGTGGATAAAAGCACCGTGAACAAACACCTGTACAACCTGGAGAGATCAAATCACGTGATCAAAACCGACCACCGGCCGCCGGTGTGGGAGCTCGCGGAGAATAACGACGGGGCGAAACGCGCGCTCGGACCGGGGGAAAGGTCGCGAGACGTGGAGGCTGCTCTCAGGTCCGGAGGGAAGAAAGCCCACCGCATCGCCGAGGAGCTGGGTGAGTCCACAAGAACCGTCAAGAGGCTGCTGTACAGTCTGGAGGAGAAGGGGAAGGCCAAGAGATGCGGCGAGAGCAGCCTGTGGACTCTGAACGGGGAGCAGAGCTTCAGCAGAGACGGTTCCTGTCCCGGTGACCCTGACCCGGAGTCGGTTTCAGGCTTGTCTTGCAGTTTCGACGTGATCGCAACGCTTGGGGAAGGAGGCTACGGCTGCGTTTATAAAGTCAAGCATAAAATCGACGGCGGGATCTACGCCGTAAAGAGGGTCGTCTTAACCCGGAACGCCGATTCTGAGGTGAAGGCGCTGGCCCGGCTGGATCACCCCAACATAGTGCGGTACGTCACGTGCTGGCCAGGTTCTGACGGCTGGACTTCAGAGCGAGAAAGAGGCCGAGCGTCCGGCACTTCGTCGGATTTCGTGACCTTTGACAGGGACGGCTGTGAAGAGGACGACGAAGAAGACGAAGACATCACATCAGGAATGGAAAGTCTGAGCGTGACAGAATCAGCGTCCGCCGCCGAGCCCTCGGGAAGCGACAGAACTGACGCCTTAGACTCAAAGCACAGCAGgagatatttattcattcagatgGACTTCTGCGAGGGAGGAACACTGACGAACTGGATAAAGGAGAGGAACTTCATGGGAAAGCAAAGAATCATTACAGAAATCCATCGgatattttatgaaattgtCACCGGAGTGGAATACATCCACGCCAACAAACTCATTCACAGAGACTTGAAGCCTGATAACATGCTGTTTGGGGCCGATGGCAAGGTGAAGATCGGAGACTTTGGGCTGGTGGCGGCTCAGACCGATCGGAGCGGGGACCCTATAGAGAGGTCAAACAGAGGGACGGCGTCTTACATGAGTCCTGAACAGaaAAGCAAGAAGGATTACGACgaaaaaactgacatttttccCCTCGGGCTCGTGCTGTTCGTGATGATCTGGGAAATATCCACCGTTAGTGAAAGAGACAAGCTGTGGCCGGGTCTGAGAGACCGAAGGTTTCCGGAAGGCTTCGGTGACCGTTACCCGACCGAGAGTAAGTTCATCGTGAAGATGCTGTCGTACTCACCAGAGCACAGACCGCACGCCAAAGCCATAAAAGAAGAAGTGGAGAAGTTTTTCTCTCTGGATCACAATCTAAGCCAGAAAACTGTCTGAGTCTTTTATGGACAGAAATCGTCTCAGcagttctttttaaaacaatgattcGTTTTGATGATTTAATTGATTCATGCGTGATCTAATGaactatttaaagaaatagttcacccaaaaatgaaaattctgtcatcgttctATTTTGGGTCatcattgacttccatggtattttttttccatctatTGAAGTCAACGGTGACCAAAACGTCCGGGTAGCAAACTTTCTTCCAAAAGTTgcgttcggcagaacaaagtaACTCATGCGGGTTTGGAACTAGTcgaaaattaattttcattttggcgtGAACTGTTCCTTGAGTGTTCTCTTATTAAGATGATAATATAAACCGAggagtggttttatttttttacataataataatgtcaaataatgTTCTCTTTGTGTATTCATCATAAtcaaattcatttcatttgatgttGCGGGGCTGCTTTTAGAAATCCTAGTAATTTTAGGAATTGTTGCATGAAACTGATATGTGACTGCAATGTGACCGCATACTCAAAGTTGCCGTTGTTTGGTTGAAATGCAATATCGTGCGataatgtgaaaacattttgtgctgGCGGAGAAGATTTCTGCTTCAACCTTTAACCTTTGACTTTAAGCCatcatgtgtttttctttgtcaaaCGTACTGTTTATGCtggaataagaaagaaatattatttcattaatgtcaacaatataaattttattaaagaaactgTTACTAAAATTGTTGCCAGAACCATTCGGTTATATTTGAATTGTATTTCAATGCTTAAATTTGGGACGATGTTaccattttaaatagaaattattaatacaatatatatgaaACAGT

Function

GO:

id name namespace
GO:0006468 protein phosphorylation biological_process
GO:0000166 nucleotide binding molecular_function
GO:0004672 protein kinase activity molecular_function

KEGG:

id description
K16195 EIF2AK2; eukaryotic translation initiation factor 2-alpha kinase 2

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU141256 lncRNA downstream 1554 20518600 ~ 20520093 (-) True G95524
TU141247 lncRNA downstream 6336 20514773 ~ 20515311 (-) True G95519
TU141232 lncRNA downstream 246391 20264726 ~ 20275256 (-) False LOC122356211
TU141230 lncRNA downstream 283420 20236678 ~ 20238227 (-) True G95506
XR_006252294.1 lncRNA downstream 380689 20108191 ~ 20140958 (-) True LOC122356209
TU141285 lncRNA upstream 77412 20620047 ~ 20620719 (-) True G95537
TU141279 lncRNA upstream 78627 20621262 ~ 20623143 (-) True G95535
TU141282 lncRNA upstream 78627 20621262 ~ 20678269 (-) False G95535
TU141283 lncRNA upstream 78627 20621262 ~ 20623230 (-) False G95535
TU141307 lncRNA upstream 286143 20828778 ~ 20829053 (-) True G95549
XM_043256235.1 mRNA downstream 18999 20347147 ~ 20502648 (-) True nid1a
XM_043254721.1 mRNA downstream 175965 20275777 ~ 20345682 (-) True lyst
XM_043254718.1 mRNA downstream 246261 20264785 ~ 20275386 (-) False LOC122356211
XM_043254719.1 mRNA downstream 246616 20264785 ~ 20275031 (-) True LOC122356211
XM_043254720.1 mRNA downstream 246958 20264785 ~ 20274689 (-) False LOC122356211
XM_043256110.1 mRNA upstream 140 20542775 ~ 20546992 (-) True LOC122356970
XM_043255695.1 mRNA upstream 29685 20572320 ~ 20595986 (-) False mypn
XM_043255694.1 mRNA upstream 29685 20572320 ~ 20595986 (-) True mypn
XM_043255696.1 mRNA upstream 32943 20575578 ~ 20595989 (-) False mypn
XM_043256163.1 mRNA upstream 56089 20598724 ~ 20606506 (-) True cacul1
TU141237 other downstream 24783 20493642 ~ 20496864 (-) True G95511
TU141235 other downstream 29571 20488785 ~ 20492076 (-) True G95510
TU141250 other downstream 34943 20479925 ~ 20486704 (-) True G95520
TU141252 other downstream 34943 20481443 ~ 20486704 (-) False G95520
XR_006252430.1 other downstream 377920 20143596 ~ 20143727 (-) True LOC122357145
TU141260 other upstream 27403 20570038 ~ 20571562 (-) True G95526
TU141433 other upstream 464837 21007472 ~ 21180217 (-) True G95646
unassigned_transcript_1931 other upstream 871165 21413800 ~ 21413871 (-) True trnag-gcc_70
unassigned_transcript_1932 other upstream 1031616 21574251 ~ 21574321 (-) True trnag-gcc_71
unassigned_transcript_1933 other upstream 1110977 21653612 ~ 21653681 (-) True trnag-gcc_72

Expression Profile