Gene
RNA
| Item | Value |
|---|---|
| RNA id | XM_043254876.1 |
| length | 927 |
| RNA type | mRNA |
| GC content | 0.42 |
| exon number | 5 |
| gene id | c1d |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_056711.1 |
| NCBI id | CM032080.1 |
| chromosome length | 25085836 |
| location | 23134818 ~ 23136642 (-) |
| genome version | ASM1883169v1_2021_tiger_barb_Genome |
| species | tiger barb (Puntius tetrazona) |
| id | name | namespace |
|---|---|---|
| GO:0006364 | rRNA processing | biological_process |
| GO:0005730 | nucleolus | cellular_component |
| GO:0005737 | cytoplasm | cellular_component |
| GO:0003677 | DNA binding | molecular_function |
| GO:0003723 | RNA binding | molecular_function |
| id | description |
|---|---|
| K12592 | C1D, LRP1; exosome complex protein LRP1 |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU142019 | lncRNA | downstream | 104918 | 23017198 ~ 23029900 (-) | True | G96061 |
| TU142018 | lncRNA | downstream | 127355 | 23006279 ~ 23007463 (-) | True | G96060 |
| TU142008 | lncRNA | downstream | 140249 | 22994037 ~ 22994569 (-) | False | G96053 |
| TU142011 | lncRNA | downstream | 140249 | 22994152 ~ 22994569 (-) | False | G96053 |
| TU141986 | lncRNA | downstream | 300406 | 22833829 ~ 22834412 (-) | True | G96044 |
| TU142099 | lncRNA | upstream | 15563 | 23152205 ~ 23154495 (-) | True | G96108 |
| TU142100 | lncRNA | upstream | 15563 | 23152205 ~ 23154495 (-) | False | G96108 |
| TU142128 | lncRNA | upstream | 40160 | 23176802 ~ 23178096 (-) | True | G96117 |
| TU142211 | lncRNA | upstream | 302635 | 23439277 ~ 23443783 (-) | False | si:ch211-130h14.4 |
| TU142295 | lncRNA | upstream | 402136 | 23538778 ~ 23542300 (-) | True | G96254 |
| XM_043254796.1 | mRNA | downstream | 315361 | 22802718 ~ 22819457 (-) | True | LOC122356266 |
| XM_043254794.1 | mRNA | downstream | 645495 | 22485289 ~ 22489323 (-) | True | LOC122356263 |
| XM_043254793.1 | mRNA | downstream | 686807 | 22435248 ~ 22448011 (-) | False | LOC122356262 |
| XM_043254651.1 | mRNA | downstream | 805526 | 22326705 ~ 22329292 (-) | True | ypel5 |
| XM_043254650.1 | mRNA | downstream | 811309 | 22317240 ~ 22323509 (-) | True | slc30a10 |
| XM_043254869.1 | mRNA | upstream | 20460 | 23157102 ~ 23167091 (-) | False | LOC122356317 |
| XM_043254868.1 | mRNA | upstream | 20460 | 23157102 ~ 23167091 (-) | True | LOC122356317 |
| XM_043254878.1 | mRNA | upstream | 31231 | 23167873 ~ 23168903 (-) | False | mrps6 |
| XM_043254877.1 | mRNA | upstream | 31231 | 23167873 ~ 23168902 (-) | True | mrps6 |
| XM_043254695.1 | mRNA | upstream | 47273 | 23183915 ~ 23238517 (-) | False | micu1 |
| TU142010 | other | downstream | 139219 | 22994663 ~ 22995599 (-) | True | G96053 |
| TU141976 | other | downstream | 311559 | 22821981 ~ 22823259 (-) | True | G96036 |
| TU141977 | other | downstream | 312304 | 22821981 ~ 22822514 (-) | False | G96036 |
| TU141882 | other | downstream | 691532 | 22379092 ~ 22443286 (-) | False | LOC122356262 |
| TU141887 | other | downstream | 695820 | 22371567 ~ 22438998 (-) | True | LOC122356262 |
| XR_006252429.1 | other | upstream | 1133672 | 24270314 ~ 24270449 (-) | True | LOC122357144 |
| TU142459 | other | upstream | 1206219 | 24342861 ~ 24344630 (-) | False | borcs7 |
| TU142467 | other | upstream | 1262481 | 24399123 ~ 24403644 (-) | False | fgf8a |
