Gene
RNA
| Item | Value |
|---|---|
| RNA id | XM_043255032.1 |
| length | 4766 |
| RNA type | mRNA |
| GC content | 0.49 |
| exon number | 18 |
| gene id | fgfr2 |
| representative | False |
| Item | Value |
|---|---|
| chromosome id | NC_056711.1 |
| NCBI id | CM032080.1 |
| chromosome length | 25085836 |
| location | 18458198 ~ 18504277 (-) |
| genome version | ASM1883169v1_2021_tiger_barb_Genome |
| species | tiger barb (Puntius tetrazona) |
| id | name | namespace |
|---|---|---|
| GO:0006915 | apoptotic process | biological_process |
| GO:0003140 | determination of left/right asymmetry in lateral mesoderm | biological_process |
| GO:0071910 | determination of liver left/right asymmetry | biological_process |
| GO:0008543 | fibroblast growth factor receptor signaling pathway | biological_process |
| GO:0006468 | protein phosphorylation | biological_process |
| GO:0008284 | positive regulation of cell population proliferation | biological_process |
| GO:0033278 | cell proliferation in midbrain | biological_process |
| GO:0048701 | embryonic cranial skeleton morphogenesis | biological_process |
| GO:0035469 | determination of pancreatic left/right asymmetry | biological_process |
| GO:0061371 | determination of heart left/right asymmetry | biological_process |
| GO:0005794 | Golgi apparatus | cellular_component |
| GO:0005886 | plasma membrane | cellular_component |
| GO:0016021 | integral component of membrane | cellular_component |
| GO:0005524 | ATP binding | molecular_function |
| GO:0017134 | fibroblast growth factor binding | molecular_function |
| GO:0005007 | fibroblast growth factor-activated receptor activity | molecular_function |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU140300 | lncRNA | downstream | 2072 | 18452872 ~ 18456126 (-) | True | LOC122356994 |
| XR_006252406.1 | lncRNA | downstream | 2072 | 18453375 ~ 18456126 (-) | False | LOC122356994 |
| TU140264 | lncRNA | downstream | 86847 | 18218993 ~ 18371351 (-) | False | G94826 |
| TU140303 | lncRNA | upstream | 36109 | 18540385 ~ 18540700 (-) | True | G94843 |
| TU140305 | lncRNA | upstream | 39376 | 18543652 ~ 18543984 (-) | True | G94845 |
| XR_006252272.1 | lncRNA | upstream | 41295 | 18545571 ~ 18561469 (-) | False | LOC122356088 |
| TU140317 | lncRNA | upstream | 119207 | 18623483 ~ 18627312 (-) | True | G94849 |
| TU140447 | lncRNA | upstream | 411969 | 18916245 ~ 18916650 (-) | True | G94941 |
| XM_043256047.1 | mRNA | downstream | 74488 | 18380035 ~ 18383710 (-) | True | ftr69 |
| XM_043256046.1 | mRNA | downstream | 78175 | 18373868 ~ 18380023 (-) | False | LOC122356930 |
| XM_043256045.1 | mRNA | downstream | 78947 | 18373868 ~ 18379251 (-) | True | LOC122356930 |
| XM_043254801.1 | mRNA | downstream | 377592 | 18073731 ~ 18080606 (-) | False | fndc5a |
| XM_043254551.1 | mRNA | upstream | 70508 | 18574784 ~ 18585116 (-) | True | LOC122356087 |
| XM_043255967.1 | mRNA | upstream | 202073 | 18706349 ~ 18743542 (-) | True | LOC122356886 |
| XM_043255968.1 | mRNA | upstream | 202073 | 18706349 ~ 18742753 (-) | False | LOC122356886 |
| XM_043255972.1 | mRNA | upstream | 202073 | 18706349 ~ 18742753 (-) | False | LOC122356886 |
| XM_043255965.1 | mRNA | upstream | 202073 | 18706349 ~ 18742753 (-) | False | LOC122356886 |
| unassigned_transcript_1930 | other | downstream | 738492 | 17719634 ~ 17719706 (-) | True | trnav-aac_26 |
| unassigned_transcript_1929 | other | downstream | 739019 | 17719107 ~ 17719179 (-) | True | trnav-cac_10 |
| unassigned_transcript_1928 | other | downstream | 2010436 | 16447691 ~ 16447762 (-) | True | trnah-gug_23 |
| TU139697 | other | downstream | 2031663 | 16425697 ~ 16426535 (-) | True | G94412 |
| TU139489 | other | downstream | 2165832 | 16290154 ~ 16292366 (-) | False | cisd1 |
| TU140311 | other | upstream | 41305 | 18545581 ~ 18672893 (-) | True | LOC122356088 |
| TU140313 | other | upstream | 41305 | 18545581 ~ 18672893 (-) | False | LOC122356088 |
| TU140314 | other | upstream | 41305 | 18545581 ~ 18672893 (-) | False | LOC122356088 |
| XR_006252356.1 | other | upstream | 1363737 | 19868013 ~ 19907062 (-) | False | disc1 |
| XR_006252430.1 | other | upstream | 1639320 | 20143596 ~ 20143727 (-) | True | LOC122357145 |
