RNA id: XM_043256098.1


Basic Information

Item Value
RNA id XM_043256098.1
length 1256
RNA type mRNA
GC content 0.50
exon number 7
gene id tbxtb
representative False

Chromosome Information

Item Value
chromosome id NC_056711.1
NCBI id CM032080.1
chromosome length 25085836
location 23425032 ~ 23429064 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome
species tiger barb
(Puntius tetrazona)

Sequence

CCTGGAGAGTATTTAATTGGGTGCGTCTCTGCAAGTCTTGGGCATTTTCTGACTGGAGAGCTCGGgtagttttgatttttttttttcttgttggaGCCACTTGGATAGCAGAATGGCATCTGAGACCAGCGACTGCTCGGAAAAGAGCGTCCAGTATCGGGTGGATCATTTATTAACTGCTGTGGAGAACGAGCTTCAAGCCGGCAGTGAGAAAGGAGATCCAACAGAAAGGGACCTTAAAGTCAGTTTGGATGAAAATGAACTTTGGAAGAAGTTCAAAGAACTGACCAATGAAATGATAGTGACCAAGAATGGCAGGCGCATGTTCCCAGTGCTGAAGGTGAACGTGTCCGGTCTGGATCCAAACGCCATGTACTCCTTCTTACTGGATTTCGTGGCAGCAGACAAACACAGGTGGAAGTACGTGAACGGCGAATGGGTGCCGGGCGGCAAACCCGAGCCACAAGCGCCGAGCTGCGTCTACATCCATCCGGACTCGCCGAACTTCGGCGCGCACTGGATGAAAAACCCAGTCTCCTTCAGCAAAGTCAAACTTACCAACAAACTGAACGGAGGTGGCCAGattatgCTGAACTCGCTGCACAAGTACGAGCCCCGTATCCATATCGTGAGAGTAGGTGGTCCACAGAGAATGATCACCACTCACTCATTCTCCGAGACGCAATTCATAGCAGTTACTGCCTATCAGAACGAAGAGatTACAGCtctcaaaattaaatataacccATTTGCCAAGGCTTTTCTGGATGCAAAAGaaagaaGTGATCATAAAGACGTAATAGAGGATGTCAGTGAAAGCCAACAGTCTGGTTATTCTCAAcCTGGTTACTCTGATAGCTCCAACTGCCTGTCCATGCTGCCGCCTCATGATAACTGGTCTAGTCTGCAGATGTCCTCTCACTCCAGCGTGCTCCCGATGGGCCACAGCTCTCCCACAAACTCAAACTCCAGTCAGTACACCAGCCTGTGGTCCGTAGGGAACTCTCCCTTGACCCCTGTGTCTCAGACTGGAAGTATAGGTAGCAGTCTGGGCTCCCAGTTCCTCCGAGGATCTGCCGGTCACTACAGCAGCCTGGCTCACCCGGTCACAGCACCCTCTTCTGGCTCTGCTTTATATGACTCCACTACTGAGGTTCACGAGGCTTCACAATATGACAGTTCAGCACATGTACGCCTTCCTACAGCCTGGACCCAAGTCACGTCACCCTCCTTATAGGAGATCCACCCTaaggatg

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU142128 lncRNA downstream 246936 23176802 ~ 23178096 (-) True G96117
TU142099 lncRNA downstream 270537 23152205 ~ 23154495 (-) True G96108
TU142100 lncRNA downstream 270537 23152205 ~ 23154495 (-) False G96108
TU142019 lncRNA downstream 395132 23017198 ~ 23029900 (-) True G96061
TU142018 lncRNA downstream 417569 23006279 ~ 23007463 (-) True G96060
TU142211 lncRNA upstream 10213 23439277 ~ 23443783 (-) False si:ch211-130h14.4
TU142295 lncRNA upstream 109714 23538778 ~ 23542300 (-) True G96254
TU142315 lncRNA upstream 498267 23927331 ~ 23928060 (-) True G96265
TU142336 lncRNA upstream 613464 24042528 ~ 24067735 (-) True G96279
TU142347 lncRNA upstream 641096 24070160 ~ 24070488 (-) True G96286
XM_043255473.1 mRNA downstream 8181 23332820 ~ 23416851 (-) False pde10a
XM_043255478.1 mRNA downstream 8188 23332820 ~ 23416844 (-) False pde10a
XM_043255472.1 mRNA downstream 8788 23332820 ~ 23416244 (-) False pde10a
XM_043255476.1 mRNA downstream 8793 23332820 ~ 23416239 (-) False pde10a
XM_043255475.1 mRNA downstream 8820 23332820 ~ 23416212 (-) False pde10a
XM_043254534.1 mRNA upstream 582 23429646 ~ 23444063 (-) False si:ch211-130h14.4
XM_043254535.1 mRNA upstream 582 23429646 ~ 23444063 (-) False si:ch211-130h14.4
XM_043254536.1 mRNA upstream 582 23429646 ~ 23444063 (-) True si:ch211-130h14.4
XM_043254537.1 mRNA upstream 15115 23444179 ~ 23446166 (-) True prr18
XM_043255790.1 mRNA upstream 18269 23447333 ~ 23464851 (-) True sft2d1
TU142010 other downstream 429433 22994663 ~ 22995599 (-) True G96053
TU141976 other downstream 601773 22821981 ~ 22823259 (-) True G96036
TU141977 other downstream 602518 22821981 ~ 22822514 (-) False G96036
TU141882 other downstream 981746 22379092 ~ 22443286 (-) False LOC122356262
XR_006252429.1 other upstream 841250 24270314 ~ 24270449 (-) True LOC122357144
TU142459 other upstream 913797 24342861 ~ 24344630 (-) False borcs7
TU142467 other upstream 970059 24399123 ~ 24403644 (-) False fgf8a

Expression Profile