RNA id: XM_043256104.1


Basic Information

Item Value
RNA id XM_043256104.1
length 5847
RNA type mRNA
GC content 0.41
exon number 17
gene id slc24a3
representative True

Chromosome Information

Item Value
chromosome id NC_056711.1
NCBI id CM032080.1
chromosome length 25085836
location 24891953 ~ 24951267 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome
species tiger barb
(Puntius tetrazona)

Sequence

tctctctctctctctctctctctctctctttctgactGCGTTCACTTCCTTACTTTCaatcctccctccctccctctcgcGCTCTCTCCTCCTCTACATCCTCGATCTCTCAGCAGCAGCAGTTTGTGTCCTGAGAGAACTGGCACCAAACTGACGCATCCATGGGGCGCGCGCAGCATCTTTATTTCACCACACTACAATTTGAAGTCATATAGGGGGAAATATTCGAGTCAACGCAGCAAACACACTAGAGCCGTTCGGCGTCTCATCTTCCGGCTTAAAACTCTCAGTCGCACCGTATCTGTTTGCGTTTGTGACATTTGTAGCTGTGTTGAGCTGCGGTGATGGATGGGGACGCGTGCGTTCGCGTGTGGACTCGACCGCTGCAAGTGATGCTCCAGCAGAAGAAGATCAAAGCGCGGAGGAAAAAGCGCAAGGAGTTGTTCGGAGGACAGATGTGCTTCATGGGGCTGCTGCTGGTGGCGGTGTCCGGCTTGTCCAGTTTGGCCGAGAATTCCGGTTATAGCATCTCCAGTCTCTCCGCTGAAGATAGTGCAAGGTGGGAAAGCCGCAGGTTGCTGCAGGACTTTGACATTGACAGCAACTACACTGATGAAGTGCAGGTTGGGCCCAATGCTGAAAAGAACTGCACACCACCTGGTATACACGAGTTCCCTGATGATATCTTCACCAACCAGGAGCGAATGGAGGGGGCCGTAGCCTTGCACGTTCTGTGTgccatgtatatgttttatgcGCTGGCATTGGTGTGTGATGACTACTTTGTTCCCTCTCTGGAGAAGATCTGTGAGCGCCTCCATCTCAGTGAGGATGTAGCAGGAGCCACATTCATGGCAGCAGGAAGTTCAGCTCCTGAACTCTTCACCTCAGTCATAGGTGTATTTATCACCAAAGGAGATGTGGGAGTGGGCACAATCGTGGGTTCTGCTGTCTTCAATATCCTCTGTATCATCGGAGTGTGTGGGATCTTTACTGCACAGGCAGTACGGCTCTCGTGTTGGACGTTAATGAGAGACTCGGTGTATTACACTATCGCTGTGACCACTCTGATTGTGttcatCTATGATGAAAAGGTGACATGGTGGGAATCGCTCATCCTAATAgtactgtacatattttacattatattaatgaaATTTAACTCGCGGGTGGTTCATTACATCGAACGGCGGAAAAAGAACTCTGCAAATCTGGGTAACGGCACAGCAAGCAACACAGACATCGACGATGGGTGCGATGCCACTGTCGTGCTGCTTAAGAAAGCAAATTTTCACAGGAAGCCATCAGTGCTGATGGTGGACGAGCTCTTGTCTGCATACCCTCATCAGCTGTCCTTCTCTGAGGCCGGGATGAGAATCATGATCACCAGCCACTTCTCTCCTCGCACACGCCTCACAATGGCCTCCAGAATGCTTATCACAGAGAGGCAGCGTCTGATAAACAGTCGCTTCAGTAACGGGGACTCAGAGGTGACAGTAAAGATCCCAGGAAAGCGCGGGGTGGAGAATGGGCTGGCAGGACCGGACCGAGGCCTGAACGGGCGAAAGGGGGGTCACCATGACGACGACAGGGGAGGAGCTGAAGCTGGCACTGACACTGAAAACGAGAATGAGGACAATGAAAACAATGAGAAcgatgaggaggaagaggaggaagatgacAACGAAGGACCCTATGTACCATATCGCTGCCCCGGTGGGGCCTTAAATAAGCTAAAGTGGCTGCTGGCCTGGCCACTGAGTCTGCTGCTGTTCTTCACCGTGCCCAACTGTTCCACTCCTCGCTGGGAGCGCTGGTATATGGTCTCGTTTATCAGCTCGACCCTCTGGATTGCTTTCTTCTCTTACATCATGGTTTGGATGGTCACAGTGATCGGTTACACTATGGGCATCCCTGATGTCATCATGGGCATCACTTTCTTGGCTGCTGGGACCAGCGTTCCTGACTGCTTGGCCAGTTTAATTGTTGCACGGCAAGGAATGGGTGACATGGCTGTGTCTAACTCTATCGGTAGTAACGTGTTTGATATCCTGATTGGGCTTGGTCTGCCCTGGACCCTCCAGACTTTGGCCATTGACTATGGCTCCACAATTCACCTGAACAGTAAAGGTTTGATTTTCTCAGTTGGGCTGCTGCTAGCATCTGTGTTTCTCACGGTTCTCGGTGTACATTTGAACAAGTGGAAGCTGGACAAGCGTTTGGGTTTCATTTGTTTGCTGATGTACGCTGTCTTCCTGTGTTTCTCCATCCTCATCGAGTTTAACATATTCACCTTCGTCAATCTGCCCACCTGCCGCGAGGAATGAGACGGCTCCTTTTCCCGGCCCTCCCTCCTTGACCTTGTGAGGACAACGGCACAAGTCCTCGATCAGATGCAGACTGGCTCTTGTTCTAAAGGAATACTTATTTATTGATCTAGCTGATCCTCTATTgatcctctctttttctttccaatGGGTGCAATATTAACAGAGTCTCTGGATCTGTGGTGTTacaagaggagagagaggatgTGTGCGAAGAATGGTCCTGTTGACCGATATATAGACTGTTCTAACGGGACAGGAACGTGGTAAATGATGACTACTGCCTGGTTTGAtgtgaatactttttttttcgaaatattttgcatattacatatttaaagaatatgatgtaaatgtattttatgatggaatttgttttattagctGCTAATTTACTGAAGAAGAGGCTGGACTTATTAATGTCTGTAAAAATAGAGATTTACGAGGGTTCGTTATTTTGCTGAAAGGTACTGGTGACCTCTAGGAAATACTTGTATACAGTCCTCTTTATAATTTGGGCATTACCAAGTCGTCACCTTCATAGTACAAGATCAATCTGGACGTCAGGGTCATTAGTGTCTACTTTTTTCAGATGAGAATATGTTTACGGTGCAGAGGAGGTAATAAGATCAAATTTTAGTCAAAAAAGAGATAAACAGCGGGCAATTGTTTGCACCTGTGTGGAAACACTTGTTGGAACACTTCTACCAACATATTTATGTTCAATGAGACAATGTTCTTGTGTGAAATATGGGTTTCTATAGATGTGTTTCTgaattttcttttgtctttaacACTCTGTATATACTGAAACAgagaaaggtttatttattatttattgaaaactATTTATGCACATTACTTTCCTATGACGTACTGAAACAAAACCAACCCACAGCTGTCCCAAAGAAGAGACCGTTCTGGAGTTTCACCCAGGCTACGCCGTTATGTCCTTCAGAGCTTACGTGTCAGCCTTTTCTACTGGATTCCTTCTCCTTCATCTCTGAATATTATGCACCCTTTTAGATGCACCTTTGACTTGATGCGTAAAACAGTTTCTACTATTTGATATCGGTGTGACATGACATTAGAGGTAACTGTAAAGATTTTTTGAACACTCAAAACTTTGGCAGGCAAGTAAGggaaaatatatagatagatatatattttatacttaacTGTTTTGACATTTAAGATCGGTCCATTCCCTTTTTGGAGTGAATGGAGTGAGTGAGCCTCAAACCTAAGAAGCTGATTAGCAGGAACGTGTCCTGGTAAAATGAAGCTAACGTTGATAAGACTGTTTCAAAGTCAAAACGTAGATGCTCTAGAAAAGGTCAAGTCATTTTTCTCTTAGCATGCCGCTCTTATCTTAGAGTTTATCCAGGAATTTTGGAAGAAATCTTCTCAGCAGAACAAGGATCAGAATTCATTTCTAAGGATGCAGTTAATGATATGGATTTTTCAGGAGTTCTTTATGCTGATGTGTCCGGGGCTCATTTCTTGCCCTTCTTTTCGAAGGACTATTTAAATACTTTGTTTTGTATGCCTCTGGTTCTAGGGATTTGAAAAAGACACTACCATAATGCATCACAGCTGTAAGCTTCTAACTGTGGCACAATATGTGGATGAGTGGTCTTCTTCTCCTAACTGAGGTTTTTTAGTGAGCTGACAAAGTAGCGATTCTGTGGACTGTTTTAGTCTAGTTAGAGATTTCATGCAGGTTTTCTAGTCTGAAGGCACATTGCAGggatattttgtgttttatgcacTGGTTAATACTGGGTGTCTAAttgtttgtcatattttaagAATAGAATTTAGGTGACTTAGAAACATATCTGGAAGAGTATTGCGGCAAAGTATTTTTTATCACAAAAGTAACTTTGTATTTTGTAACgcaaaatgtttagaaatgttttctgcttttaaaagtcTGTAGAGTGTGCTTCAAGTGAATCTGCATATTTATTCTTTAGATCATAAAACTAATTTGTCAGCTTACCGTCAGAGTACTTTTAGCATGCTTAAAATCAAAGGTCACACTTTGTAGGGCATTCTTTTCAACAatgtacaaaagaaaaaaagaaaatttgtcCCTAGTTTGACAgaatatatttgcaaatatgaacattttgttttctgtatcaCTCATAGTAGACATTGAGGCCTAGTTTACTTTCCGAAAATGCAACAGCAGGTCTAAGGTTTAAGCAATGTGATATTCCTGATAAATATAAGCTAGGTGTAATCCAAGTAGAGCGTACGAGCTGTGTTTGGATGCTGAAAATTGTTATTGgctattattttcttcttttcaaagCAGGGTATTATAAGAAAGACGTCGGGAAGGCAGGGTTTAATGAAAGTTTTGTTCATGAAATGCAATAATGTTTAGATGAATTAATTACTGTGTTTGCGTTTTTTGTAAATTCTAAACATGACACATCACAATCTttaaaacgtatatatatatatatatatatatatatatatatatatatatatatatatatatatatatatatatatatatattctacgtaaatatttcagtaaggTTTAATAGAGTTTGTGCACTCTATGCTCGATATTATGGATAGTAAAAAGAGGCAGAGATGCAGCTAAATTGGCTTTTACTGCAAAATTctccaaaatatataaatactgctGCTTACAGATTGTGGGACATCAATGCCTATGATTATGGTTGCAAAATCAGCCGTACTAATTTAcagattcagtgtttttaacatACTGATGACTGATGACTGATTAACATACTATTCGGTCCTCTTCACTTCCGAAAATCTAAGCGCTGCTGTTCATttgtatgcataaatataataattctaatcATAATACTGAGGGCATGCACAACCAATTAGCCCACAATTAGAGAAACTTCCCTCAGATTTCCTTTTCTTGTCTGCTGATATTTCTTCATGGATTCaggcatattttaataaaaatgtgacttttacAGGGTGATGCATTGCTGATGtacataattatacatacatgaaaatgtcttcatatttttgtctttgcctGCATATCCGTTGACTATATTTTCATACAGTAGATACTGTACAATGTTTGGgtcctttatttgtttattttatttttgttgttgttgtgttgaaGGTTTGATTAAACACCCTTGGTTTGCTAAATCGCATgggatattttaatataaggaGTTATTTATGTTCATTACTATTACACATTGTTGAGCACTGGATGGACAGCAGTGGAATTAGACCTCTTAGattattgcatgttttctttgttttatttttatttcaatggaAAACTGCTGGGCTTTTGATTCTCCAATGAAAGCATAAAATAGATATTTCATTCAAAGTAACTGATGTCTTCTGCATTTCAGGAGTCATAAAAAAGAATGGTGGTTGGCTTTATGTactaaaattttttttgttcaggtgTTTCAGTTGTATATCAGAGTACATTTTTGCTACTtgagcataataaaaatgatctttgCTGAGGTAAA

Function

GO:

id name namespace
GO:0055085 transmembrane transport biological_process
GO:0016021 integral component of membrane cellular_component

KEGG:

id description
K13751 SLC24A3, NCKX3; solute carrier family 24 (sodium/potassium/calcium exchanger), member 3

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU142582 lncRNA downstream 174991 24714219 ~ 24716962 (-) True G96436
TU142578 lncRNA downstream 178495 24710744 ~ 24713458 (-) True G96435
TU142552 lncRNA downstream 216007 24631425 ~ 24675946 (-) False G96415
XM_043254674.1 mRNA downstream 1092 24888115 ~ 24890861 (-) True si:dkey-187a12.4
XM_043255301.1 mRNA downstream 4631 24857219 ~ 24887322 (-) False rin2a
XM_043255976.1 mRNA upstream 13587 24964854 ~ 24966345 (-) True soul2
TU142467 other downstream 488309 24399123 ~ 24403644 (-) False fgf8a
TU142459 other downstream 547323 24342861 ~ 24344630 (-) False borcs7
XR_006252429.1 other downstream 621504 24270314 ~ 24270449 (-) True LOC122357144
TU142010 other downstream 1896354 22994663 ~ 22995599 (-) True G96053
TU141977 other downstream 2069439 22821981 ~ 22822514 (-) False G96036

Expression Profile