Gene
RNA
| Item | Value |
|---|---|
| RNA id | XM_043256148.1 |
| length | 1343 |
| RNA type | mRNA |
| GC content | 0.48 |
| exon number | 3 |
| gene id | vox |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_056711.1 |
| NCBI id | CM032080.1 |
| chromosome length | 25085836 |
| location | 20947987 ~ 20949698 (-) |
| genome version | ASM1883169v1_2021_tiger_barb_Genome |
| species | tiger barb (Puntius tetrazona) |
| id | name | namespace |
|---|---|---|
| GO:0006355 | regulation of transcription, DNA-templated | biological_process |
| GO:0009953 | dorsal/ventral pattern formation | biological_process |
| GO:0042661 | regulation of mesodermal cell fate specification | biological_process |
| GO:0005634 | nucleus | cellular_component |
| GO:0003700 | DNA-binding transcription factor activity | molecular_function |
| GO:0000976 | transcription regulatory region sequence-specific DNA binding | molecular_function |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU141397 | lncRNA | downstream | 21244 | 20847297 ~ 20926743 (-) | True | G95623 |
| TU141307 | lncRNA | downstream | 118934 | 20828778 ~ 20829053 (-) | True | G95549 |
| TU141282 | lncRNA | downstream | 269718 | 20621262 ~ 20678269 (-) | False | G95535 |
| TU141283 | lncRNA | downstream | 324757 | 20621262 ~ 20623230 (-) | False | G95535 |
| TU141279 | lncRNA | downstream | 324844 | 20621262 ~ 20623143 (-) | True | G95535 |
| TU141417 | lncRNA | upstream | 26581 | 20976279 ~ 20976497 (-) | True | G95635 |
| TU141424 | lncRNA | upstream | 46385 | 20996083 ~ 20996511 (-) | True | G95640 |
| TU141425 | lncRNA | upstream | 49342 | 20999040 ~ 20999265 (-) | True | G95641 |
| TU141426 | lncRNA | upstream | 51639 | 21001337 ~ 21001844 (-) | True | G95642 |
| TU141427 | lncRNA | upstream | 52929 | 21002627 ~ 21003651 (-) | True | G95643 |
| XM_043255989.1 | mRNA | downstream | 1462 | 20944584 ~ 20946525 (-) | True | vent |
| XM_043255372.1 | mRNA | downstream | 261067 | 20662202 ~ 20686920 (-) | False | blnk |
| XM_043255370.1 | mRNA | downstream | 261070 | 20662202 ~ 20686917 (-) | False | blnk |
| XM_043255371.1 | mRNA | downstream | 261071 | 20662202 ~ 20686916 (-) | False | blnk |
| XM_043255373.1 | mRNA | downstream | 271361 | 20662202 ~ 20676626 (-) | True | blnk |
| XM_043254782.1 | mRNA | upstream | 5769 | 20955467 ~ 20997713 (-) | True | LOC122356249 |
| XM_043255253.1 | mRNA | upstream | 78067 | 21027765 ~ 21042154 (-) | False | LOC122356507 |
| XM_043255251.1 | mRNA | upstream | 87287 | 21036985 ~ 21042123 (-) | True | LOC122356507 |
| XM_043255250.1 | mRNA | upstream | 260120 | 21209818 ~ 21254638 (-) | True | LOC122356506 |
| XM_043256061.1 | mRNA | upstream | 319652 | 21269350 ~ 21323003 (-) | False | LOC122356942 |
| TU141260 | other | downstream | 376425 | 20570038 ~ 20571562 (-) | True | G95526 |
| TU141237 | other | downstream | 451123 | 20493642 ~ 20496864 (-) | True | G95511 |
| TU141235 | other | downstream | 455911 | 20488785 ~ 20492076 (-) | True | G95510 |
| TU141250 | other | downstream | 461283 | 20479925 ~ 20486704 (-) | True | G95520 |
| TU141433 | other | upstream | 57774 | 21007472 ~ 21180217 (-) | True | G95646 |
| unassigned_transcript_1931 | other | upstream | 464102 | 21413800 ~ 21413871 (-) | True | trnag-gcc_70 |
| unassigned_transcript_1932 | other | upstream | 624553 | 21574251 ~ 21574321 (-) | True | trnag-gcc_71 |
| unassigned_transcript_1933 | other | upstream | 703914 | 21653612 ~ 21653681 (-) | True | trnag-gcc_72 |
| TU141816 | other | upstream | 1188631 | 22138329 ~ 22143970 (-) | False | LOC122357128 |
