RNA id: XM_043256329.1


Basic Information

Item Value
RNA id XM_043256329.1
length 939
RNA type mRNA
GC content 0.48
exon number 6
gene id glo1
representative True

Chromosome Information

Item Value
chromosome id NC_056711.1
NCBI id CM032080.1
chromosome length 25085836
location 17733938 ~ 17736960 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome
species tiger barb
(Puntius tetrazona)

Sequence

ACGCGCACCGACCACGCCCCTTGCGTGGTATCTTTCCGCCGAAGCGTCAGCCGCCGAGTGACCACCAAGCCGCAACCCGCCTAAAAAAATGACCGACCAAGGGCTGACGAACGAAGCAGCTGCCGCTGCGTGCAAAGAGGGGAACGCCATCACTAAAGACTTCATGATGCAGCAGACAATGCTTCGGGTTAAGGATCCGGTTAAGTCCCTGGATTTCTACACACGCATACTGGGAATGACGCTGTTGCAGAAGTTTGATTTCCCCTCCATGCGATTCTCCCTGTATTTTCTGGGTTATGAGGATAAGAAAGagatccccgcagaagtgaagGAGAGGACGGCCTGGACGTTCTCTCGTCGAGCCACTATAGAGCTCACACATAACTGGGGCTCCGAGACCGATGACAGCCAGTCCTACCACAATGGCAACTCAGACCCAAGAGGCTTTGGCCACATTGGAATTGCTGTACCGGATGTCTATGCTGCCTGCAAGCTGTTTGAAGAGAACGGAGTGACCTTTGTAAAAAAGCCTGATGATGGTAAAATGAAGGGCCTGGCCTTTATTCAGGATCCCGATGGCTACTGGATTGAGATTCTCAGCCCTAACAACATGGTGCCCATCACTTCATAAAGACTTTTGTTACGCTGTGACCTGATCGGAAGACGCTAGTTGTGGAAATCAAGGACTGTTGGGTGTTTGGGGATTGCTCTGTGGACAACATGGAAAACTGTGCACTACGAAGGCCGACAATCTCTGACATGACATGTGTTAGACATCCGCTGAGCTTGATATAAAACTAACGATAGAATTTGACCATTACTTAATGCATAGAGACTAACCCTAAAAGTTTACATcactaaagtaaaatatttttttgaatttttgcaGTCGTTCTAATCTCAAAACCCTAcctttgttaaaataaagcaagGCAAGTA

Function

GO:

id name namespace
GO:0004462 lactoylglutathione lyase activity molecular_function
GO:0046872 metal ion binding molecular_function

KEGG:

id description
K01759 GLO1, gloA; lactoylglutathione lyase

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU139990 lncRNA downstream 11638 17721728 ~ 17722300 (-) True G94608
XR_006252401.1 lncRNA downstream 61415 17632249 ~ 17672523 (-) True LOC122356952
TU139972 lncRNA downstream 357701 17374750 ~ 17376237 (-) False LOC122356193
TU139854 lncRNA downstream 703875 17022103 ~ 17030063 (-) True G94516
TU139837 lncRNA downstream 741854 16984506 ~ 16992084 (-) False G94511
TU140004 lncRNA upstream 53924 17790884 ~ 17791890 (-) True G94619
XR_006252405.1 lncRNA upstream 155077 17892037 ~ 17900115 (-) True LOC122356989
XR_006252304.1 lncRNA upstream 166237 17903197 ~ 17910716 (-) False LOC122356279
XR_006252303.1 lncRNA upstream 168892 17905852 ~ 17910716 (-) True LOC122356279
TU140056 lncRNA upstream 203443 17940403 ~ 17994249 (-) True G94663
XM_043256393.1 mRNA downstream 2951 17722431 ~ 17730987 (-) True btbd9
XM_043256024.1 mRNA downstream 20371 17698937 ~ 17713567 (-) True zfand3
XM_043256023.1 mRNA downstream 20372 17698937 ~ 17713566 (-) False zfand3
XM_043254725.1 mRNA downstream 185334 17547414 ~ 17548604 (-) True LOC122356215
XM_043254697.1 mRNA downstream 346932 17375993 ~ 17387006 (-) False LOC122356193
XM_043255024.1 mRNA upstream 15841 17752801 ~ 17765260 (-) True LOC122356377
XM_043255629.1 mRNA upstream 32421 17769381 ~ 17773851 (-) True khdrbs1a
XM_043255644.1 mRNA upstream 39759 17776719 ~ 17788131 (-) True chp1
XM_043255705.1 mRNA upstream 64024 17800984 ~ 17853373 (-) False runx3
XM_043255706.1 mRNA upstream 64024 17800984 ~ 17853186 (-) True runx3
unassigned_transcript_1930 other downstream 14232 17719634 ~ 17719706 (-) True trnav-aac_26
unassigned_transcript_1929 other downstream 14759 17719107 ~ 17719179 (-) True trnav-cac_10
unassigned_transcript_1928 other downstream 1286176 16447691 ~ 16447762 (-) True trnah-gug_23
TU139697 other downstream 1307403 16425697 ~ 16426535 (-) True G94412
TU139489 other downstream 1441572 16290154 ~ 16292366 (-) False cisd1
TU140311 other upstream 808621 18545581 ~ 18672893 (-) True LOC122356088
TU140313 other upstream 808621 18545581 ~ 18672893 (-) False LOC122356088
TU140314 other upstream 808621 18545581 ~ 18672893 (-) False LOC122356088
XR_006252356.1 other upstream 2131053 19868013 ~ 19907062 (-) False disc1
XR_006252430.1 other upstream 2406636 20143596 ~ 20143727 (-) True LOC122357145

Expression Profile