RNA id: unassigned_transcript_1928



Basic Information


Item Value
RNA id unassigned_transcript_1928
length 72
RNA type tRNA
GC content 0.60
exon number 1
gene id trnah-gug_23
representative True

Chromosome Information


Item Value
chromosome id NC_056711.1
NCBI id CM032080.1
chromosome length 25085836
location 16447691 ~ 16447762 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome
species tiger barb
(Puntius tetrazona)

Sequence


gccgtgatcgtatagtggttagtactctgcgttgtggccgcagcaaccccggttcgaatccgggtcacggca

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU139701 lncRNA downstream 15261 16430674 ~ 16432430 (-) True G94416
TU139699 lncRNA downstream 17398 16429841 ~ 16430293 (-) True G94414
TU139696 lncRNA downstream 23898 16422666 ~ 16423793 (-) True G94411
TU139539 lncRNA downstream 70768 16376573 ~ 16376923 (-) True G94308
TU139518 lncRNA downstream 115344 16330142 ~ 16332347 (-) True G94298
TU139711 lncRNA upstream 68095 16515857 ~ 16518826 (-) True G94425
TU139759 lncRNA upstream 120153 16567915 ~ 16569250 (-) True G94453
TU139762 lncRNA upstream 145663 16593425 ~ 16594731 (-) True G94455
TU139834 lncRNA upstream 536744 16984506 ~ 17015657 (-) True G94511
TU139837 lncRNA upstream 536744 16984506 ~ 16992084 (-) False G94511
XM_043255806.1 mRNA downstream 1952 16432695 ~ 16445739 (-) False LOC122356747
XM_043255805.1 mRNA downstream 1955 16432695 ~ 16445736 (-) True LOC122356747
XM_043254968.1 mRNA downstream 85886 16335024 ~ 16361805 (-) False LOC122356349
XM_043254969.1 mRNA downstream 86635 16335024 ~ 16361056 (-) True LOC122356349
XM_043255786.1 mRNA downstream 143363 16302209 ~ 16304328 (-) True LOC122356736
XM_043255680.1 mRNA upstream 22173 16469935 ~ 16487675 (-) True march5
XM_043255510.1 mRNA upstream 71774 16519536 ~ 16538481 (-) True btaf1
XM_043254797.1 mRNA upstream 95319 16543081 ~ 16546492 (-) True LOC122356270
XM_043254831.1 mRNA upstream 99424 16547186 ~ 16557976 (-) True fam83ha
XM_043256166.1 mRNA upstream 123786 16571548 ~ 16592072 (-) False lrrfip2
TU139697 other downstream 21156 16425697 ~ 16426535 (-) True G94412
TU139489 other downstream 155325 16290154 ~ 16292366 (-) False cisd1
XR_006252284.1 other downstream 284938 16011802 ~ 16162753 (-) False pcdh15a
unassigned_transcript_1929 other upstream 1271345 17719107 ~ 17719179 (-) True trnav-cac_10
unassigned_transcript_1930 other upstream 1271872 17719634 ~ 17719706 (-) True trnav-aac_26
TU140311 other upstream 2097819 18545581 ~ 18672893 (-) True LOC122356088
TU140313 other upstream 2097819 18545581 ~ 18672893 (-) False LOC122356088
TU140314 other upstream 2097819 18545581 ~ 18672893 (-) False LOC122356088