RNA id: unassigned_transcript_1931



Basic Information


Item Value
RNA id unassigned_transcript_1931
length 72
RNA type tRNA
GC content 0.61
exon number 1
gene id trnag-gcc_70
representative True

Chromosome Information


Item Value
chromosome id NC_056711.1
NCBI id CM032080.1
chromosome length 25085836
location 21413800 ~ 21413871 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome
species tiger barb
(Puntius tetrazona)

Sequence


gcattggtggttcagtggtagaattcttcgcctgccacgcgggaggcccgggttcgattcccggccaatgca

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU141427 lncRNA downstream 410149 21002627 ~ 21003651 (-) True G95643
TU141426 lncRNA downstream 411956 21001337 ~ 21001844 (-) True G95642
TU141425 lncRNA downstream 414535 20999040 ~ 20999265 (-) True G95641
TU141424 lncRNA downstream 417289 20996083 ~ 20996511 (-) True G95640
TU141417 lncRNA downstream 437303 20976279 ~ 20976497 (-) True G95635
TU141539 lncRNA upstream 73643 21487514 ~ 21495153 (-) True G95715
TU141779 lncRNA upstream 460642 21874513 ~ 21874929 (-) True G95899
TU141784 lncRNA upstream 625911 22039782 ~ 22040106 (-) True G95903
TU141782 lncRNA upstream 700825 22114696 ~ 22120442 (-) True G95902
TU141813 lncRNA upstream 722065 22135936 ~ 22136391 (-) True G95922
XM_043256061.1 mRNA downstream 90797 21269350 ~ 21323003 (-) False LOC122356942
XM_043256060.1 mRNA downstream 90799 21269350 ~ 21323001 (-) True LOC122356942
XM_043255250.1 mRNA downstream 159162 21209818 ~ 21254638 (-) True LOC122356506
XM_043255253.1 mRNA downstream 371646 21027765 ~ 21042154 (-) False LOC122356507
XM_043255251.1 mRNA downstream 371677 21036985 ~ 21042123 (-) True LOC122356507
XM_043254705.1 mRNA upstream 433559 21847430 ~ 21866898 (-) True valopa
XM_043254889.1 mRNA upstream 494487 21908358 ~ 22024610 (-) True LOC122356328
XM_043255712.1 mRNA upstream 627584 22041455 ~ 22051686 (-) True pwwp2b
XM_043256219.1 mRNA upstream 738164 22152035 ~ 22156844 (-) False tmem254
XM_043254898.1 mRNA upstream 743794 22157665 ~ 22183174 (-) False srfb
TU141433 other downstream 233583 21007472 ~ 21180217 (-) True G95646
TU141260 other downstream 842238 20570038 ~ 20571562 (-) True G95526
TU141237 other downstream 916936 20493642 ~ 20496864 (-) True G95511
TU141235 other downstream 921724 20488785 ~ 20492076 (-) True G95510
TU141250 other downstream 927096 20479925 ~ 20486704 (-) True G95520
unassigned_transcript_1932 other upstream 160380 21574251 ~ 21574321 (-) True trnag-gcc_71
unassigned_transcript_1933 other upstream 239741 21653612 ~ 21653681 (-) True trnag-gcc_72
TU141816 other upstream 724458 22138329 ~ 22143970 (-) False LOC122357128
TU141794 other upstream 737871 22151742 ~ 22156824 (-) False tmem254
TU141795 other upstream 737871 22151742 ~ 22156859 (-) True tmem254