Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU152807 |
| length | 444 |
| lncRNA type | inter_gene |
| GC content | 0.41 |
| exon number | 2 |
| gene id | G103435 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_056713.1 |
| NCBI id | CM032082.1 |
| chromosome length | 23709629 |
| location | 3598966 ~ 3603766 (-) |
| genome version | ASM1883169v1_2021_tiger_barb_Genome |
| species | tiger barb (Puntius tetrazona) |
| id | name | namespace |
|---|---|---|
| GO:0099080 | supramolecular complex | cellular_component |
| GO:0099081 | supramolecular polymer | cellular_component |
| GO:0044422 | obsolete organelle part | cellular_component |
| GO:0044424 | obsolete intracellular part | cellular_component |
| GO:0044430 | obsolete cytoskeletal part | cellular_component |
| GO:0044446 | obsolete intracellular organelle part | cellular_component |
| GO:0005874 | microtubule | cellular_component |
| GO:0015630 | microtubule cytoskeleton | cellular_component |
| GO:0099512 | supramolecular fiber | cellular_component |
| GO:0099513 | polymeric cytoskeletal fiber | cellular_component |
| GO:0005622 | intracellular anatomical structure | cellular_component |
| GO:0043226 | organelle | cellular_component |
| GO:0043228 | non-membrane-bounded organelle | cellular_component |
| GO:0043229 | intracellular organelle | cellular_component |
| GO:0043232 | intracellular non-membrane-bounded organelle | cellular_component |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU152782 | lncRNA | downstream | 51938 | 3538208 ~ 3547028 (-) | True | G103416 |
| TU152767 | lncRNA | downstream | 113336 | 3481163 ~ 3485630 (-) | True | G103404 |
| TU152727 | lncRNA | downstream | 178189 | 3420311 ~ 3420777 (-) | True | G103377 |
| TU152721 | lncRNA | downstream | 238594 | 3359828 ~ 3360372 (-) | True | G103371 |
| TU152711 | lncRNA | downstream | 446302 | 3151728 ~ 3152664 (-) | True | G103363 |
| TU152810 | lncRNA | upstream | 4083 | 3607849 ~ 3609465 (-) | True | G103438 |
| TU152829 | lncRNA | upstream | 221513 | 3825279 ~ 3825555 (-) | True | G103452 |
| TU152831 | lncRNA | upstream | 222788 | 3826554 ~ 3826758 (-) | True | G103454 |
| TU152832 | lncRNA | upstream | 223196 | 3826962 ~ 3827178 (-) | True | G103455 |
| TU152841 | lncRNA | upstream | 231424 | 3835190 ~ 3836248 (-) | True | G103464 |
| XM_043258410.1 | mRNA | downstream | 119166 | 3462493 ~ 3479800 (-) | True | rcbtb2 |
| XM_043258411.1 | mRNA | downstream | 119166 | 3464188 ~ 3479800 (-) | False | rcbtb2 |
| XM_043258412.1 | mRNA | downstream | 119166 | 3469633 ~ 3479800 (-) | False | rcbtb2 |
| XM_043258409.1 | mRNA | downstream | 136575 | 3424942 ~ 3462391 (-) | False | mtus2b |
| XM_043259618.1 | mRNA | upstream | 148213 | 3751979 ~ 3773785 (-) | False | LOC122359312 |
| XM_043258404.1 | mRNA | upstream | 234090 | 3837856 ~ 3927360 (-) | False | mre11a |
| XM_043258405.1 | mRNA | upstream | 234090 | 3837856 ~ 3927323 (-) | True | mre11a |
| XM_043258403.1 | mRNA | upstream | 234090 | 3837856 ~ 3927066 (-) | False | mre11a |
| XM_043258407.1 | mRNA | upstream | 250063 | 3853829 ~ 3927068 (-) | False | mre11a |
| TU152714 | other | downstream | 435418 | 3156930 ~ 3163548 (-) | False | LOC122358351 |
| TU152584 | other | downstream | 730345 | 2756019 ~ 2868621 (-) | False | LOC122359209 |
| XR_006252687.1 | other | downstream | 852842 | 2719882 ~ 2746124 (-) | False | nek3 |
| XR_006252686.1 | other | downstream | 852842 | 2719882 ~ 2746124 (-) | False | nek3 |
| TU152529 | other | downstream | 923141 | 2674074 ~ 2675825 (-) | False | LOC122359207 |
| TU152818 | other | upstream | 149575 | 3753341 ~ 3770263 (-) | False | LOC122359312 |
| TU152820 | other | upstream | 149575 | 3753341 ~ 3773814 (-) | True | LOC122359312 |
| TU152821 | other | upstream | 149575 | 3753341 ~ 3755167 (-) | False | LOC122359312 |
| TU152826 | other | upstream | 212296 | 3816062 ~ 3816742 (-) | True | G103449 |
| TU153319 | other | upstream | 1834282 | 5438048 ~ 5438947 (-) | True | G103825 |
