Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU169826 |
| length | 1360 |
| lncRNA type | inter_gene |
| GC content | 0.48 |
| exon number | 1 |
| gene id | G115020 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_056714.1 |
| NCBI id | CM032083.1 |
| chromosome length | 28146790 |
| location | 21167994 ~ 21169353 (+) |
| genome version | ASM1883169v1_2021_tiger_barb_Genome |
| species | tiger barb (Puntius tetrazona) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU169778 | lncRNA | upstream | 25964 | 21141042 ~ 21142030 (+) | True | G114983 |
| XR_006252821.1 | lncRNA | upstream | 35889 | 21129128 ~ 21132105 (+) | False | LOC122360615 |
| TU169784 | lncRNA | upstream | 35892 | 21129277 ~ 21132102 (+) | True | LOC122360615 |
| TU169773 | lncRNA | upstream | 47462 | 21118149 ~ 21120532 (+) | True | G114978 |
| XR_006252804.1 | lncRNA | upstream | 238553 | 20928702 ~ 20929441 (+) | True | LOC122360417 |
| TU169926 | lncRNA | downstream | 221428 | 21390781 ~ 21391162 (+) | True | G115074 |
| TU170003 | lncRNA | downstream | 524141 | 21693494 ~ 21694544 (+) | True | G115134 |
| TU170026 | lncRNA | downstream | 658863 | 21828216 ~ 21829531 (+) | True | G115157 |
| TU170090 | lncRNA | downstream | 827657 | 21997010 ~ 22001617 (+) | True | G115200 |
| TU170216 | lncRNA | downstream | 1357804 | 22527157 ~ 22530262 (+) | True | G115288 |
| XM_043260165.1 | mRNA | upstream | 10945 | 21147757 ~ 21157049 (+) | True | kcnv1 |
| XM_043261058.1 | mRNA | upstream | 50304 | 21107087 ~ 21117690 (+) | True | ptpn23a |
| XM_043261059.1 | mRNA | upstream | 50304 | 21109875 ~ 21117690 (+) | False | ptpn23a |
| XM_043261440.1 | mRNA | upstream | 383553 | 20778080 ~ 20784441 (+) | True | cmtm6 |
| XM_043260061.1 | mRNA | upstream | 393616 | 20770464 ~ 20774378 (+) | True | cmtm7 |
| XM_043262099.1 | mRNA | downstream | 41499 | 21210852 ~ 21314454 (+) | True | si:dkey-22o22.2 |
| XM_043260619.1 | mRNA | downstream | 177304 | 21346657 ~ 21354616 (+) | True | ndufaf6 |
| XM_043261013.1 | mRNA | downstream | 195986 | 21365339 ~ 21378842 (+) | True | plekhf2 |
| XM_043261817.1 | mRNA | downstream | 223489 | 21392842 ~ 21405824 (+) | False | LOC122360960 |
| XM_043261813.1 | mRNA | downstream | 223491 | 21392844 ~ 21405824 (+) | True | LOC122360960 |
| unassigned_transcript_2160 | other | upstream | 29042 | 21138881 ~ 21138952 (+) | True | trnae-cuc_37 |
| XR_006252832.1 | other | upstream | 940917 | 20219644 ~ 20227077 (+) | False | hjv |
| TU169046 | other | upstream | 1520188 | 19645958 ~ 19647806 (+) | False | LOC122360533 |
| TU168846 | other | upstream | 1839231 | 19327104 ~ 19328763 (+) | True | G114382 |
| TU168814 | other | upstream | 1914948 | 19197804 ~ 19253046 (+) | True | G114352 |
| XR_006252812.1 | other | downstream | 680636 | 21849989 ~ 21872972 (+) | False | tgfbr2b |
| TU170042 | other | downstream | 714576 | 21883929 ~ 21894532 (+) | False | stt3b |
| TU170081 | other | downstream | 807764 | 21977117 ~ 21979368 (+) | True | G115193 |
| TU170321 | other | downstream | 1740208 | 22909561 ~ 22911076 (+) | False | LOC122359863 |
| TU170371 | other | downstream | 1795216 | 22964569 ~ 22970526 (+) | False | LOC122360067 |
| species | RNA id | representative | length | rna type | GC content | exon number | chromosome id | location |
|---|---|---|---|---|---|---|---|---|
| grasscarp (Ctenopharyngodon idella) | CI01000016_00251025_00251471.mRNA | True | 1269 | mRNA | 0.45 | 1 | CI01000016 | 250218 ~ 251486 (-) |
| rainbow trout (Oncorhynchus mykiss) | TU151250 | True | 1391 | lncRNA | 0.42 | 2 | NC_048566.1 | 30557566 ~ 30572768 (+) |
