RNA id: XM_043261790.1


Basic Information

Item Value
RNA id XM_043261790.1
length 3108
RNA type mRNA
GC content 0.52
exon number 12
gene id osbpl10b
representative True

Chromosome Information

Item Value
chromosome id NC_056714.1
NCBI id CM032083.1
chromosome length 28146790
location 21922962 ~ 21961491 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome
species tiger barb
(Puntius tetrazona)

Sequence

TATAAGCTGCAGCATTCCTGTCGGTGGAGCGCGGGAGGGGAGTGACCACACACCGATTCCAATGGAAACACGGAGAAGCCCATTAAAGAGTCCAAGGCAAGCCAGCAAGAGAAAAATGAAAGTACTCTCCAGTCACCTCCTCTCCATACGATGATCATTTTCAGCAgtgtctttgttttgcttttgaaacTGTGCTTTGGATTTTGAACCGTCACGTTGCGCGATCCAGAGTTTGGAATAAATCATGGAAAAATCACTGAACGTGTCGCATTCGGGGAACAGTAAAGGAAAGTGGTCCGTTGATCTGGGGAATCCCGCACACAGACAGGCAAGAAGCGGCtcttatagtccaggaacaggggCTGTCTCGGACACTCACCCGTCTCAGACCCAAAAGAGACACTTGGAGGGGGTTTTGAACAAATACACCAATTTACTACAAGGCTGGCAGAACAGGTATTTTGTGTTGGACCCTGAGCTCGGCCAGCTTCAGTATTTCATCAACGAGCACAGTAAGAACCAAAAGCCGCGAGGGTCCCTGCCCCTCATCGGCTCCTCGGTGGCCCCAAGTGATGAGTTTCCCTACATGTTCACAGTCTGTGCTGCAAATGGAGATTTCTTCAAACTGCGGGCCTGTGATGCGCGTGAGCAGCAGATGTGGATGACCCAGCTTCAGCTGTGTGCCCGTCGCCACTCAGACGGCAGTGCCAAGGGCtgcacctcctcctcctcctgcaacacctcctcctcctcctcttcctccgcCGGCCGGACCCGCAGCTTCTCCCTGCACCCGCACCCCGTCCCACAGTGCTCCTCCATCTCCACCCAAAGACAGACCCCTCAGCACGGGACGCCTGCCTCTGTCATCACCATCACCCATCACAAGTCTCCCACCACCAGCCAACGGGCCTGCAGTCAGCATCCTCCGGGACTGCACCAGGTCAAAGAGGTCATGTCACAGGCAGAAGGCCAACAGAAGAACCTGGTGAATTCCATTGAGTCGTTGCCAAGCCGGGGACCGCTGTCCTCCCTGGACCAGGATCTGCTGCTGCTCAAAGCCACGTCCGCAGCCACTCTCAGCTGTCTGGGAGAATGCCTGAGTATCCTTCAGCACAACGTGTGCCAGGCTGCCCAACACATCACCCACGGCCACACACAGGGATCGAATACAGATAATGTGTCTAATTGGTCAAGGCCCAAAGCCGCCTCAGAAGGTCAGGTGAAGAATGGAGAACTGACACGTAACAACACCTCAACCAGACATCAGCCCCACTCTCCACTTCACAGAAACAGAGAACGGCTCAAAGACACAGAGaacTCCAGCTCCGAATCGGTGGACTCCAGCGAGGAGATCACAGACACAGAAGATAATGAGGAGGAAGACCTCGGAGTCTTGGATGACCAGAGGAGCATCATCCTCCATCTGCTGTCTCAACTCAAGCTGGGCATGGACCTCACACGgGTGGTGTTGCCCACGTTCATCTTAGAAAAGCGCTCTCTTTTGGAGATGTATGCCAACTTCATGGCCCATCCGGATGTGTTTTTGGCCATCACATCTGGAGCGACAGGAGAGGAACGAATGATCCGGTTTGTTGAATACTACTTGACGGCTTTCCACGAGGGTCGCAAAGGTGCTGTGGCCAAGAAGCCTTACAACCCCATTCTGGGGGAGAGCTTCCAATGCACATGGGACGTACCGCAAGATAAGGTGCGACCCCTCAGGACTACCAGCTCAAGTCCAGCCCCTGCGGCTGCTCATTCCACCCAGACTGCCTCCAATGAGGGGCTAGGATCTTACCGGCTACGATTTGTGGCTGAGCAGGTGTCCCACCACCCTCCGGTCTCTGGATTCTACTGCGAGTGCAAAGAGCGGCAGATATGCGTCAACACCCATGTTTGGACTAAAAGCAAATTCATGGGCATGTCCATAGGAGTGTCAATGGTTGGAGAAGGAGTGCTACATCTCTTGGAGCACGACGAGGAGTACGTGTTCACGCTGCCGTCTGCCTACGCCCGCTCCATCCTCACAGTGCCCTGGGTGGAGCTGGGCGGGAAGGTTTCCATCTGCTGCGCCAAAAGCGGATACTCTTCCACCGTCACATTCCACACCAAACCCTTCTACGGAGGGAAGGTTCACAGAGTCACGGCCGAGGTGAAGCACAACCCCACCGGCACCATCGTCTGCAAGGCTCAGGGGGAGTGGAACGGGACGCTGGAGTTCACCTACAGCAGCGGAGAGACCAAAGTGATCGACACCTCCAAACTGCCAGTCATTAAGAAGAAGATCCGGCCGCTGGACAAACAGGGCCAGTATGAATCGAGGAGGCTGTGGCAGCATGTGACGGCGGCACTGAAGGCCGGGGACATTGACGCAGCCACTGAACACAAACACCAGttagaggagagacagagaagagaagggAAGCAGAGAACGGCCAGCAGCACCACCTGGAAACCCAAGTACTTCATTAAAGAAGGGGAAGGATGGGTGTACCACAGTCCTCTATGGAAGACGAAGTGATGAAATCAGGCTGGAGCCACATGATTTGGGTCCATCACAGACCTCCAGCCCCGCGGATGGGAGCGTCCATGAGGGGCTGACCGACCAATAGGACTCAAGGAGCAGGGAAAGACATTCATCCATTTCTCCAACTCCTCTAATGGAGAATGGAAGgtgccaaaaacaaaaaaacaaaaaatgaactcgagggtagtaaaaaaaaaaatacctcaaAAGCCCCTCTGGATAATGAAGATTTGAACATAGAGGCCTGGATTGTGTGACGTTGTGCAATatctttatatttgtatattacttCTGGTAATCAATACTGAGTAAAGTGATTTTTCACAGAGGAGAGACGTAGCATCTGTATCAGAGTATAACCgttatattactgttattttagaACACCGTAAAGGCAGATATTGATGCCAGTCACATTCTGGGTATTGGAGAGCAGCGGAGTATTCGTGTTCTGTAGAGCTCACCACTCGTGTTCTTACTGTTTTATTCAAACGACTGAATCAATCTTACCATATGAGGACAGTATTGTGCTTCGGTTGAACTTCATGAAGAAAGAataaaatggatatttaaaggaa

Function

GO:

id name namespace
GO:0006869 lipid transport biological_process

KEGG:

id description
K20465 OSBPL9_10_11, ORP9_10_11; oxysterol-binding protein-related protein 9/10/11

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU170039 lncRNA downstream 48911 21873826 ~ 21874051 (-) True G115170
TU170024 lncRNA downstream 97525 21825198 ~ 21825437 (-) True G115155
TU169974 lncRNA downstream 308783 21605980 ~ 21614179 (-) False cenpw
TU169954 lncRNA downstream 533815 21388815 ~ 21389147 (-) True G115098
TU169865 lncRNA downstream 591604 21331012 ~ 21331358 (-) True G115051
TU170171 lncRNA upstream 268749 22230240 ~ 22237066 (-) True G115262
TU170280 lncRNA upstream 721936 22683427 ~ 22683638 (-) True G115335
TU170525 lncRNA upstream 812275 22773766 ~ 22774032 (-) True G115496
TU170565 lncRNA upstream 924224 22885715 ~ 22888001 (-) True G115536
TU170567 lncRNA upstream 930615 22892106 ~ 22901138 (-) False cdc42se1
XM_043260130.1 mRNA downstream 266242 21654319 ~ 21656720 (-) True hint3
XM_043260042.1 mRNA downstream 271851 21640097 ~ 21651111 (-) True trmt11
XM_043261465.1 mRNA downstream 308759 21605958 ~ 21614203 (-) True cenpw
XM_043260090.1 mRNA downstream 491155 21412868 ~ 21431807 (-) True rspo3
XM_043261479.1 mRNA upstream 7346 21968837 ~ 21970707 (-) True kiaa1143
XM_043260809.1 mRNA upstream 11181 21972672 ~ 21982802 (-) False zdhhc3a
XM_043260810.1 mRNA upstream 13001 21974492 ~ 21982803 (-) True zdhhc3a
XM_043261870.1 mRNA upstream 29783 21991274 ~ 22001056 (-) False sybu
XM_043261872.1 mRNA upstream 29783 21991274 ~ 22001055 (-) False sybu
TU170018 other downstream 119158 21801475 ~ 21803804 (-) True G115149
TU170010 other downstream 218003 21704018 ~ 21704959 (-) True G115141
TU169980 other downstream 361746 21560221 ~ 21561216 (-) False G115116
TU169979 other downstream 361902 21560221 ~ 21561060 (-) True G115116
XR_006252759.1 other downstream 511190 21410291 ~ 21411772 (-) False mettl6
TU170105 other upstream 3364 21964855 ~ 21968535 (-) True G115207
TU170138 other upstream 126158 22087649 ~ 22089054 (-) False eny2
TU170599 other upstream 971136 22932627 ~ 22933967 (-) True G115554
TU171080 other upstream 1558317 23519808 ~ 23524382 (-) True G115882
XR_006252802.1 other upstream 1626694 23588185 ~ 23609841 (-) False usp45

Expression Profile