RNA id: TU189596



Basic Information


Item Value
RNA id TU189596
length 244
lncRNA type inter_gene
GC content 0.57
exon number 1
gene id G128451
representative True

Chromosome Information


Item Value
chromosome id NC_056716.1
NCBI id CM032085.1
chromosome length 26409628
location 22994098 ~ 22994341 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome
species tiger barb
(Puntius tetrazona)

Sequence


CAGGCAGGAGTCTGTCACACTCTCCCAGATTCTCGCTGGCCTGGCTCTTTAGTGGTGGGATGATGATGGTGCGGGGGTTTCCGTTGCTGTAGTTGTCCAGGACAGCGCCTTTGGAGTCGTAGCCGTTGGCATTGGGGCCATTAGGTCGGGACTCCACAGCGTACGGGCTGGTATTGCTGGAGTCAGAGTCAGGGGAGTCATGGACCgtcacacagctgatgacattCTTCCTCTGTTTGGATGA

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU189576 lncRNA upstream 49972 22941582 ~ 22944126 (+) True G128431
XR_006253164.1 lncRNA upstream 430894 22560391 ~ 22563204 (+) True LOC122362810
TU189515 lncRNA upstream 442484 22550445 ~ 22551614 (+) True G128385
TU189508 lncRNA upstream 450565 22536775 ~ 22543533 (+) True G128379
TU189598 lncRNA downstream 1410 22995751 ~ 22996031 (+) True G128453
TU189600 lncRNA downstream 3423 22997764 ~ 23001633 (+) True G128454
TU189604 lncRNA downstream 8094 23002435 ~ 23002655 (+) True G128458
TU189605 lncRNA downstream 9328 23003669 ~ 23004127 (+) True G128459
TU189608 lncRNA downstream 11617 23005958 ~ 23006443 (+) True G128462
XM_043263894.1 mRNA upstream 104598 22854504 ~ 22889500 (+) False fgd4a
XM_043264245.1 mRNA downstream 86686 23081027 ~ 23140905 (+) False tbxas1
XM_043264246.1 mRNA downstream 86743 23081084 ~ 23140905 (+) True tbxas1
XM_043216705.1 mRNA downstream 247132 23241473 ~ 23242712 (+) True LOC122323065
XM_043263982.1 mRNA downstream 250196 23244537 ~ 23250136 (+) True LOC122362508
XM_043264185.1 mRNA downstream 256534 23250875 ~ 23258449 (+) True tat
TU189495 other upstream 555419 22434806 ~ 22438679 (+) True G128367
TU189467 other upstream 587116 22400974 ~ 22406982 (+) True LOC122363143
XR_006246928.1 other upstream 2437471 20551148 ~ 20556627 (+) False si:dkey-30c15.17
TU188799 other upstream 2444780 20547827 ~ 20549318 (+) False glipr1b
TU188630 other upstream 2906517 20086695 ~ 20087581 (+) False zfhx3a
TU189951 other downstream 462759 23457100 ~ 23579802 (+) False cdh13
TU189952 other downstream 730295 23724636 ~ 23736846 (+) False cdh13
TU190171 other downstream 1455424 24449765 ~ 24457560 (+) True G128858
TU190455 other downstream 1589504 24583845 ~ 24588045 (+) False LOC122323037
XR_006246977.1 other downstream 2001430 24995771 ~ 24995950 (+) True LOC122323238

Expression Profile