RNA id: TU189615



Basic Information


Item Value
RNA id TU189615
length 203
lncRNA type inter_gene
GC content 0.46
exon number 1
gene id G128469
representative True

Chromosome Information


Item Value
chromosome id NC_056716.1
NCBI id CM032085.1
chromosome length 26409628
location 23057020 ~ 23057222 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome
species tiger barb
(Puntius tetrazona)

Sequence


TAGGAACAAGGGCCCTATGTTAATCCCATAAGCTACTAGGCCAGATGTCACTCCTTGGATTACGCTTTTCTTTGCCAGGTctttatgctaaaaataatttgtacGTGGTCAGTGGCTCTGTATGTGTTAGTATGTGTGTTTGGCGGAGGTGGGGATGGAGCCTGGAAAGTAATAAATCTCCCACGGCAACGGCTGATCAGATG

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU189613 lncRNA upstream 2491 23053402 ~ 23054529 (+) True G128467
TU189608 lncRNA upstream 50577 23005958 ~ 23006443 (+) True G128462
TU189605 lncRNA upstream 52893 23003669 ~ 23004127 (+) True G128459
TU189604 lncRNA upstream 54365 23002435 ~ 23002655 (+) True G128458
TU189600 lncRNA upstream 55387 22997764 ~ 23001633 (+) True G128454
TU189616 lncRNA downstream 165 23057387 ~ 23059941 (+) True G128470
TU189621 lncRNA downstream 9590 23066812 ~ 23067068 (+) True G128475
TU189624 lncRNA downstream 11088 23068310 ~ 23080310 (+) True G128476
TU189930 lncRNA downstream 278569 23335791 ~ 23337089 (+) True G128696
TU189935 lncRNA downstream 301229 23358451 ~ 23359557 (+) True G128699
XM_043263894.1 mRNA upstream 167520 22854504 ~ 22889500 (+) False fgd4a
XM_043264245.1 mRNA downstream 23805 23081027 ~ 23140905 (+) False tbxas1
XM_043264246.1 mRNA downstream 23862 23081084 ~ 23140905 (+) True tbxas1
XM_043216705.1 mRNA downstream 184251 23241473 ~ 23242712 (+) True LOC122323065
XM_043263982.1 mRNA downstream 187315 23244537 ~ 23250136 (+) True LOC122362508
XM_043264185.1 mRNA downstream 193653 23250875 ~ 23258449 (+) True tat
TU189495 other upstream 618341 22434806 ~ 22438679 (+) True G128367
TU189467 other upstream 650038 22400974 ~ 22406982 (+) True LOC122363143
XR_006246928.1 other upstream 2500393 20551148 ~ 20556627 (+) False si:dkey-30c15.17
TU188799 other upstream 2507702 20547827 ~ 20549318 (+) False glipr1b
TU188630 other upstream 2969439 20086695 ~ 20087581 (+) False zfhx3a
TU189951 other downstream 399878 23457100 ~ 23579802 (+) False cdh13
TU189952 other downstream 667414 23724636 ~ 23736846 (+) False cdh13
TU190171 other downstream 1392543 24449765 ~ 24457560 (+) True G128858
TU190455 other downstream 1526623 24583845 ~ 24588045 (+) False LOC122323037
XR_006246977.1 other downstream 1938549 24995771 ~ 24995950 (+) True LOC122323238

Expression Profile