RNA id: TU189621



Basic Information


Item Value
RNA id TU189621
length 257
lncRNA type inter_gene
GC content 0.34
exon number 1
gene id G128475
representative True

Chromosome Information


Item Value
chromosome id NC_056716.1
NCBI id CM032085.1
chromosome length 26409628
location 23066812 ~ 23067068 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome
species tiger barb
(Puntius tetrazona)

Sequence


gaagaaagaaatatgagagcaaatgagatatatataattctttacATTCCCATATATAATTCTTTACATTAACTATTCGCTAATGCATGTAATTCAGGGGGCCGTATTTTTCATCTTTCCCTTTCAACTGACGTCAAGTCTTTTACAAAGATAGGCTAccgagttattttttttaaccccatCATTCAAATCAGGCCACAGACACATAACGCAATCCATTCCTGATGAATAAAGTCAAGCCCTGTTCTACATCTTTT

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU189616 lncRNA upstream 6871 23057387 ~ 23059941 (+) True G128470
TU189615 lncRNA upstream 9590 23057020 ~ 23057222 (+) True G128469
TU189613 lncRNA upstream 12283 23053402 ~ 23054529 (+) True G128467
TU189608 lncRNA upstream 60369 23005958 ~ 23006443 (+) True G128462
TU189605 lncRNA upstream 62685 23003669 ~ 23004127 (+) True G128459
TU189624 lncRNA downstream 1242 23068310 ~ 23080310 (+) True G128476
TU189930 lncRNA downstream 268723 23335791 ~ 23337089 (+) True G128696
TU189935 lncRNA downstream 291383 23358451 ~ 23359557 (+) True G128699
TU189981 lncRNA downstream 717956 23785024 ~ 23787163 (+) True G128725
TU190019 lncRNA downstream 961421 24028489 ~ 24029817 (+) True G128753
XM_043263894.1 mRNA upstream 177312 22854504 ~ 22889500 (+) False fgd4a
XM_043264245.1 mRNA downstream 13959 23081027 ~ 23140905 (+) False tbxas1
XM_043264246.1 mRNA downstream 14016 23081084 ~ 23140905 (+) True tbxas1
XM_043216705.1 mRNA downstream 174405 23241473 ~ 23242712 (+) True LOC122323065
XM_043263982.1 mRNA downstream 177469 23244537 ~ 23250136 (+) True LOC122362508
XM_043264185.1 mRNA downstream 183807 23250875 ~ 23258449 (+) True tat
TU189495 other upstream 628133 22434806 ~ 22438679 (+) True G128367
TU189467 other upstream 659830 22400974 ~ 22406982 (+) True LOC122363143
XR_006246928.1 other upstream 2510185 20551148 ~ 20556627 (+) False si:dkey-30c15.17
TU188799 other upstream 2517494 20547827 ~ 20549318 (+) False glipr1b
TU188630 other upstream 2979231 20086695 ~ 20087581 (+) False zfhx3a
TU189951 other downstream 390032 23457100 ~ 23579802 (+) False cdh13
TU189952 other downstream 657568 23724636 ~ 23736846 (+) False cdh13
TU190171 other downstream 1382697 24449765 ~ 24457560 (+) True G128858
TU190455 other downstream 1516777 24583845 ~ 24588045 (+) False LOC122323037
XR_006246977.1 other downstream 1928703 24995771 ~ 24995950 (+) True LOC122323238

Expression Profile