RNA id: TU189930


Basic Information

Item Value
RNA id TU189930
length 315
lncRNA type inter_gene
GC content 0.57
exon number 2
gene id G128696
representative True

Chromosome Information

Item Value
chromosome id NC_056716.1
NCBI id CM032085.1
chromosome length 26409628
location 23335791 ~ 23337089 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome
species tiger barb
(Puntius tetrazona)

Sequence

TGTCACCTTCTGCAGGGGCTTGCGCAGTGTGTTGGTGGTGTTATTGTTGCGCCTAGCTCTACCAGGATCTCGCTGGAGTTGACGATGGAAGGTGGTGGTGAGAGGGGCAGGGCTGGAGGCGGGACAGGGTGGTGGTCGGGGGTGGCGTGGGCGGCTCAGGCCGCAGCAGACGCAAAGGCATGGGCGGCTTCCTCTCACTTTGCTGCTGACAACCGTTTCGGATTTCCTTGAGACTGGGAGAGTTGTCTCgacCTCTCGAGTCTTTGTGAATCATGGAAACTTTTGAAAATAGTTCCTTATTCCTCTCAGGTGGCC

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU189624 lncRNA upstream 255481 23068310 ~ 23080310 (+) True G128476
TU189621 lncRNA upstream 268723 23066812 ~ 23067068 (+) True G128475
TU189616 lncRNA upstream 275850 23057387 ~ 23059941 (+) True G128470
TU189615 lncRNA upstream 278569 23057020 ~ 23057222 (+) True G128469
TU189613 lncRNA upstream 281262 23053402 ~ 23054529 (+) True G128467
TU189935 lncRNA downstream 21362 23358451 ~ 23359557 (+) True G128699
TU189981 lncRNA downstream 447935 23785024 ~ 23787163 (+) True G128725
TU190019 lncRNA downstream 691400 24028489 ~ 24029817 (+) True G128753
TU190041 lncRNA downstream 719631 24056720 ~ 24063271 (+) True G128770
TU190043 lncRNA downstream 721264 24058353 ~ 24066103 (+) True G128772
XM_043264329.1 mRNA upstream 30453 23289516 ~ 23305338 (+) True plcg2
XM_043216857.1 mRNA upstream 47728 23283862 ~ 23288063 (+) True meak7
XM_043264187.1 mRNA upstream 59321 23271267 ~ 23276470 (+) True cotl1
XM_043264186.1 mRNA upstream 69666 23262358 ~ 23266125 (+) True zgc:56622
XM_043264185.1 mRNA upstream 77342 23250875 ~ 23258449 (+) True tat
XM_043216624.1 mRNA downstream 136985 23474074 ~ 23736848 (+) True cdh13
XM_043264127.1 mRNA downstream 452304 23789393 ~ 23814740 (+) True zgc:173742
XM_043264172.1 mRNA downstream 480964 23818053 ~ 23853275 (+) False si:dkey-246g23.2
XM_043264176.1 mRNA downstream 480964 23818053 ~ 23852960 (+) False si:dkey-246g23.2
XM_043264174.1 mRNA downstream 481236 23818325 ~ 23853275 (+) False si:dkey-246g23.2
TU189495 other upstream 897112 22434806 ~ 22438679 (+) True G128367
TU189467 other upstream 928809 22400974 ~ 22406982 (+) True LOC122363143
XR_006246928.1 other upstream 2779164 20551148 ~ 20556627 (+) False si:dkey-30c15.17
TU188799 other upstream 2786473 20547827 ~ 20549318 (+) False glipr1b
TU188630 other upstream 3248210 20086695 ~ 20087581 (+) False zfhx3a
TU189951 other downstream 120011 23457100 ~ 23579802 (+) False cdh13
TU189952 other downstream 387547 23724636 ~ 23736846 (+) False cdh13
TU190171 other downstream 1112676 24449765 ~ 24457560 (+) True G128858
TU190455 other downstream 1246756 24583845 ~ 24588045 (+) False LOC122323037
XR_006246977.1 other downstream 1658682 24995771 ~ 24995950 (+) True LOC122323238

Expression Profile