RNA id: TU191118



Basic Information


Item Value
RNA id TU191118
length 212
lncRNA type sense_over
GC content 0.54
exon number 2
gene id G129435
representative True

Chromosome Information


Item Value
chromosome id NC_056716.1
NCBI id CM032085.1
chromosome length 26409628
location 25967016 ~ 26221023 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome
species tiger barb
(Puntius tetrazona)

Sequence


TGAGAATCTCTGCAGTAGTGTTTGGAGCTCAAATAGAGGCCTGGCAAGCTGCTGGCCAGGTCCAGCCTACGGAAAAACCACACCAGGTTCCAGAACACAATAGGGTGGTGATCCACAATGGCTGCAGATGAGATGGCCTGATCCCCCTCGTTCTCCAGCAAGCTTTCCAGTTCCTTCCACAGCACCAAAGGACTCAGGTAGGGCACGGTAAC

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU191014 lncRNA upstream 290155 25676557 ~ 25676861 (+) True G129370
TU191012 lncRNA upstream 291706 25675071 ~ 25675310 (+) True G129368
TU191004 lncRNA upstream 303431 25662497 ~ 25663585 (+) True G129360
TU190852 lncRNA upstream 524575 25440048 ~ 25442441 (+) True G129270
TU190833 lncRNA upstream 617978 25348756 ~ 25349038 (+) True G129262
TU191154 lncRNA downstream 8071 26229094 ~ 26284050 (+) True G129454
TU191157 lncRNA downstream 55879 26276902 ~ 26326567 (+) False G129454
TU191158 lncRNA downstream 111203 26332226 ~ 26335988 (+) True G129455
TU191214 lncRNA downstream 158680 26379703 ~ 26380285 (+) True G129491
XR_006246935.1 lncRNA downstream 186766 26407789 ~ 26408862 (+) True LOC122323030
XM_043264898.1 mRNA upstream 4435 25952330 ~ 25962581 (+) True slc24a1
XM_043264335.1 mRNA upstream 23068 25940729 ~ 25943948 (+) True hacd3
XM_043264798.1 mRNA upstream 46041 25906919 ~ 25920975 (+) True arih1
XM_043216558.1 mRNA upstream 64101 25897542 ~ 25902915 (+) False LOC122322950
XM_043216559.1 mRNA upstream 64101 25897551 ~ 25902915 (+) True LOC122322950
XM_043264250.1 mRNA downstream 79893 26300916 ~ 26303177 (+) True LOC122362692
XM_043264251.1 mRNA downstream 79893 26300916 ~ 26303177 (+) False LOC122362692
XM_043216744.1 mRNA downstream 124989 26346012 ~ 26357471 (+) False LOC122323090
XM_043216743.1 mRNA downstream 126149 26347172 ~ 26357471 (+) True LOC122323090
TU191117 other upstream 13244 25952398 ~ 25953772 (+) False slc24a1
unassigned_transcript_2193 other upstream 69511 25897423 ~ 25897505 (+) True trnal-cag_32
TU190830 other upstream 618422 25346405 ~ 25348594 (+) True mt2
XR_006253170.1 other upstream 658951 25294743 ~ 25308065 (+) False kiaa0513
XR_006253171.1 other upstream 658951 25294743 ~ 25308065 (+) False kiaa0513
TU191156 other downstream 8071 26229094 ~ 26332010 (+) False G129454
TU191172 other downstream 82864 26303887 ~ 26306806 (+) True G129468
TU191155 other downstream 109449 26330472 ~ 26332010 (+) False G129454

Expression Profile