RNA id: TU191156


Basic Information

Item Value
RNA id TU191156
length 1069
RNA type TUCP
GC content 0.54
exon number 5
gene id G129454
representative False

Chromosome Information

Item Value
chromosome id NC_056716.1
NCBI id CM032085.1
chromosome length 26409628
location 26229094 ~ 26332010 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome
species tiger barb
(Puntius tetrazona)

Sequence

cttttttttttttttttttttttttttTTAAGTGTAATTAAAAGGcctttattttctcatttgtttcagTACAGAGCTGGTAACACACATGGTAAATCTGTAGAGCTATTTGGTTCCCTTGACGTCTTTACAAGGATTGCTGATGCTCATGTACTGTCCACTAGGGGGTTGTGGGAAGAGTCTGTGAGCAACGTTTTCTCAAAGTGTCCCATCAAGGGCTAAAGCATGCGATTGATCCACACTAGGCACGACAATACGGACatgaacacacgcacacacacgagAACACCGAAACAGGTACAAACATAGCCTGAGGGACGAACCCTACGAACGGGTGAAGAAACGCTCCTCACACTCCGGTAGTCACAGGCGGTTCCCCAGCACAGGCAGCTGTGAGGCAGGAGGGAGCAACTCTCTCCAGAACAGTCCTGTGCGCTCCCTCCTCACTGGAACAGCCAGTCCAGCATGCCCTCCACCCCTGACCTGAGAACACGGAGCTACGTGCACTCAGCCAGTCTAACTCAGCCATTCCGTGGCCGAAGTTCCAGTTTGGAGTCTCAGGGGAAGCTGCTATCTTTGGAGGCAGACACAGAGGTGGGACTTAGCCCTGACCTGTTTCTGTCAGGACCACAGAGGACAGGAAGCAATGGCTCTGTTGTCCCCGACGACTGCTCATCTTGCACCAGCCACTCCAGTTCAGAACATTACTACCCCTCATCCACCTCCAACCCTAACTACTGTACGCTGGCCGAGGACTCGCCCTCCAAAGCCCGGCAGCGGCAACGACAGCGCCACAAGTCTGCCGGACACCTGGGCGCATCCAGTTCTGGCAGCATGCCTAACCTTGCGGCACGCAACGGGAGCACCCACGGAGGGGTGTGCGGTAGCCACCAGGGTGTGTACCTCCACAGCCAGAGCCAACCCTCCTCGCAGTATCGCATCAAAGAATACCCGCTGTACACAGAGGGCAGCAGCCCCAGCGCCGTGGTCGTCCGCAGCCTGGAGAATGACCAAGAGGGGCACTACAGCGTCAAGGCGCAGTTCAAGACCTCCAACTCATACACAGCCG

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU191118 lncRNA upstream 8071 25967016 ~ 26221023 (+) True G129435
TU191140 lncRNA upstream 15750 26212930 ~ 26213344 (+) True G129446
TU191110 lncRNA upstream 68675 26160025 ~ 26160419 (+) True G129427
TU191132 lncRNA upstream 70592 26156907 ~ 26158502 (+) True G129438
TU191014 lncRNA upstream 552233 25676557 ~ 25676861 (+) True G129370
TU191158 lncRNA downstream 216 26332226 ~ 26335988 (+) True G129455
TU191214 lncRNA downstream 47693 26379703 ~ 26380285 (+) True G129491
XR_006246935.1 lncRNA downstream 75779 26407789 ~ 26408862 (+) True LOC122323030
XM_043264163.1 mRNA upstream 32706 26191004 ~ 26196388 (+) True LOC122362626
XM_043264898.1 mRNA upstream 266513 25952330 ~ 25962581 (+) True slc24a1
XM_043264335.1 mRNA upstream 285146 25940729 ~ 25943948 (+) True hacd3
XM_043264798.1 mRNA upstream 308119 25906919 ~ 25920975 (+) True arih1
XM_043216558.1 mRNA upstream 326179 25897542 ~ 25902915 (+) False LOC122322950
XM_043216744.1 mRNA downstream 14002 26346012 ~ 26357471 (+) False LOC122323090
XM_043216743.1 mRNA downstream 15162 26347172 ~ 26357471 (+) True LOC122323090
TU191105 other upstream 54938 25921267 ~ 26174156 (+) True G129424
TU191117 other upstream 275322 25952398 ~ 25953772 (+) False slc24a1
unassigned_transcript_2193 other upstream 331589 25897423 ~ 25897505 (+) True trnal-cag_32
TU190830 other upstream 880500 25346405 ~ 25348594 (+) True mt2
XR_006253170.1 other upstream 921029 25294743 ~ 25308065 (+) False kiaa0513

Expression Profile