RNA id: TU191158


Basic Information

Item Value
RNA id TU191158
length 1438
lncRNA type inter_gene
GC content 0.47
exon number 4
gene id G129455
representative True

Chromosome Information

Item Value
chromosome id NC_056716.1
NCBI id CM032085.1
chromosome length 26409628
location 26332226 ~ 26335988 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome
species tiger barb
(Puntius tetrazona)

Sequence

TCAATGCTTCAGATGGCCGTGGAGGACGAATAGGGACACTAGTGAAGGGGTCACCAGctgcaTCTCCACACAGTCAGAGGAGTGGAACTCCTGCAGTGACCCTGCAGCTACACCCCCCTGCAGTCCACAACACATACTCAACTGGCAGAGCGGTGATACGACTGAAAGTTCTCCTACTGAAGACCGTTCTCCCTCTCACCAAAGCACTGACCAGTAGAGAgATCACCGTTCTCCGATAGTTGTTTCCTGAGCAGTCCCCTGTGCTCTGAGATAGTGGACGTACAGTGGTACGGGCACGAGAAGGCAAAGCCGGGAACTCTCGTCTAAACTATCATCCCTCATCCCTCTCTCTTTAAAAGAGTGTTCAGAAGGCAGGCCTGACCAAAGTCTGGACCTCAACTCATCTGAAAACCCTATGGCTGGAGCCAGTACCACCTCGACCTCTCCTTCTTTATCTCTCTGTATATCCGGCGGTACAGTGCTTATGAACTATGGGAATACAAGAGTCTGAATGAACTGAGCTTGACCTTGTCTGACCCTCCCACTCTGACTTTTGAACTTTGACCCAGTAAGCTGGCAGCCAGTTCCTCCGTATGCACAAACCCTCCATGTTTAATCCATCGCTGGATTAATGTGCATAAGAGAGACGTCTTATGCGCGTTGTACTATAAGTGAACCCCACACACATGCTAAAATAGACACATGTCCCCTGCTGTCGTGTGTGTCCCTCTGCACTGATGTCAGAGAGCCGGCATCGTTCTCTctcatgcacaaaaaaaaaaaaaacattccgaTGGATTGCTTTGGCGTCAACCATCTTTGTAGATCTTTATGTTCTCAGTAACAGTATGTGATTACAAGCCCCTCTTTCATCCTACAGCGCCACTTCTCATTGGACCGGAGTGCATCATAAGCCCCTCCACTGTCTGTGAACTTTGATACTTTGTGAATAACAatagagcatttaaaaaaaaaaggcagaagcCTTGCTGATGAAGAAGGATGAGCCCTGATATCATATCGCTCAAGATTACTACGTCACAAGTACGACATTCCGAAGAAATTCAAAACATTGTGGTCTTTGTGCGTAATGTTGATTTGTCATTCTCAAGTTTATCGATACTGGTCCATTTTCGCAGAACATTAGCTAACTTAGAAGCCATAGCTGTACAACAAATCTGAAAACGTTTAGCTTAGAGGCTTTAGCATGACCCTCGGCTTTATACGACCGATCTGTGAAGTGCTGCAACTCAGGCGCAACCGGCAACTTCGCCACCATGGTGCTCTGAGCCTGAACTGCATCCCACAATGCCCTGCTATATGCTCACACTGCATGAACACAGTCACAAACCCCCCCGCGTATAGTGTTGTGACATCAGTGAAGTAACGAGACACACGAAAAAACCTTCTCCAAACACTCCTGGCCTTATGGGTTTCC

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU191157 lncRNA upstream 5659 26276902 ~ 26326567 (+) False G129454
TU191154 lncRNA upstream 48176 26229094 ~ 26284050 (+) True G129454
TU191118 lncRNA upstream 111203 25967016 ~ 26221023 (+) True G129435
TU191140 lncRNA upstream 118882 26212930 ~ 26213344 (+) True G129446
TU191110 lncRNA upstream 171807 26160025 ~ 26160419 (+) True G129427
TU191214 lncRNA downstream 43715 26379703 ~ 26380285 (+) True G129491
XR_006246935.1 lncRNA downstream 71801 26407789 ~ 26408862 (+) True LOC122323030
XM_043264250.1 mRNA upstream 29049 26300916 ~ 26303177 (+) True LOC122362692
XM_043264251.1 mRNA upstream 29049 26300916 ~ 26303177 (+) False LOC122362692
XM_043264163.1 mRNA upstream 135838 26191004 ~ 26196388 (+) True LOC122362626
XM_043264898.1 mRNA upstream 369645 25952330 ~ 25962581 (+) True slc24a1
XM_043264335.1 mRNA upstream 388278 25940729 ~ 25943948 (+) True hacd3
XM_043216744.1 mRNA downstream 10024 26346012 ~ 26357471 (+) False LOC122323090
XM_043216743.1 mRNA downstream 11184 26347172 ~ 26357471 (+) True LOC122323090
TU191156 other upstream 216 26229094 ~ 26332010 (+) False G129454
TU191155 other upstream 216 26330472 ~ 26332010 (+) False G129454
TU191172 other upstream 25420 26303887 ~ 26306806 (+) True G129468
TU191105 other upstream 158070 25921267 ~ 26174156 (+) True G129424
TU191117 other upstream 378454 25952398 ~ 25953772 (+) False slc24a1

Expression Profile