RNA id: TU191172


Basic Information

Item Value
RNA id TU191172
length 859
RNA type TUCP
GC content 0.46
exon number 5
gene id G129468
representative True

Chromosome Information

Item Value
chromosome id NC_056716.1
NCBI id CM032085.1
chromosome length 26409628
location 26303887 ~ 26306806 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome
species tiger barb
(Puntius tetrazona)

Sequence

CATTTATGAGGGCCACTATGTAGCAGGTAGTTACAAGAAGCGTAcaggaaaaaaagcaaacactCAGAAAACAGGCAACTCgcaaaataaaggaaaacaaagagggagggagaggagaaAGTTTGAGTACAAGAGGAGATAAATAGTCACTGTGCTACAGAGTACACGAGGAGTCGACTGAAGGGCACAAGAGTGAAGAACGGTTTGCTTCCATAAAGGACATTCCAGCCCAGCTGAAAGAAAATTGTATCTCATTATCCATTGAGTTTCACCTGACTTGCAGTGTTGCAgGCTGTGCTTTAAGCCTGTATAATGGCAGAGGCTCATCAGGCAGTGGCATTTCAGTTCACCGTCACACCTGATGGCATTGACCTACAGTTGAGCCGCGAGGTTCTCAAACACATCTACCTATCTGGAGTGACATCATGGAAGAAACGTGCCATCCGCTTCAAgaatGGTGTTCTCACAGGAGTTTACCCTGCTAGTCCCTCCAGCTGGTTAATTGTAGTTATTGCAATAATGAGCACCATGTATGCCAGGATCGACCCCTCCATGGGCATGATTGACAGGATCAAGACTTCTCTACCTGTGAGCGAGTTTATGACCCTTCAGACTAAGACGGTGTTGAGTGCCATCCTGTTTGCCACAGGCCTGTGGTTATCATTCATCTTTCTGCTGCGGTACATCCTGAAAGCTCTCCTGTCCTATCATGGCTGGATCTTTGAGTCACATGGCAAAATGAGCTTCTTTACTAAAGTCTGGCTGAGTCTTGTAAAGCTGTTGTCTGGCAGACGACCGTTGCTTTACAGCTTCCAGGCATCTCTTCCCCATCTGCCAGTACCGAGTATTGATGNNNNAA

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU191154 lncRNA upstream 19837 26229094 ~ 26284050 (+) True G129454
TU191118 lncRNA upstream 82864 25967016 ~ 26221023 (+) True G129435
TU191140 lncRNA upstream 90543 26212930 ~ 26213344 (+) True G129446
TU191110 lncRNA upstream 143468 26160025 ~ 26160419 (+) True G129427
TU191132 lncRNA upstream 145385 26156907 ~ 26158502 (+) True G129438
TU191158 lncRNA downstream 25420 26332226 ~ 26335988 (+) True G129455
TU191214 lncRNA downstream 72897 26379703 ~ 26380285 (+) True G129491
XR_006246935.1 lncRNA downstream 100983 26407789 ~ 26408862 (+) True LOC122323030
XM_043264250.1 mRNA upstream 710 26300916 ~ 26303177 (+) True LOC122362692
XM_043264251.1 mRNA upstream 710 26300916 ~ 26303177 (+) False LOC122362692
XM_043264163.1 mRNA upstream 107499 26191004 ~ 26196388 (+) True LOC122362626
XM_043264898.1 mRNA upstream 341306 25952330 ~ 25962581 (+) True slc24a1
XM_043264335.1 mRNA upstream 359939 25940729 ~ 25943948 (+) True hacd3
XM_043216744.1 mRNA downstream 39206 26346012 ~ 26357471 (+) False LOC122323090
XM_043216743.1 mRNA downstream 40366 26347172 ~ 26357471 (+) True LOC122323090
TU191105 other upstream 129731 25921267 ~ 26174156 (+) True G129424
TU191117 other upstream 350115 25952398 ~ 25953772 (+) False slc24a1
unassigned_transcript_2193 other upstream 406382 25897423 ~ 25897505 (+) True trnal-cag_32
TU190830 other upstream 955293 25346405 ~ 25348594 (+) True mt2
XR_006253170.1 other upstream 995822 25294743 ~ 25308065 (+) False kiaa0513
TU191155 other downstream 23666 26330472 ~ 26332010 (+) False G129454

Expression Profile