RNA id: XM_043216920.1


Basic Information

Item Value
RNA id XM_043216920.1
length 2595
RNA type mRNA
GC content 0.45
exon number 3
gene id aqp11
representative True

Chromosome Information

Item Value
chromosome id NC_056716.1
NCBI id CM032085.1
chromosome length 26409628
location 18519991 ~ 18523564 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome
species tiger barb
(Puntius tetrazona)

Sequence

AAGAAacgaaaacattttgaaaatgtgacatCTGTCTGCTTTAAAGTTTGAAAATCAAACCCAGTTGAAATCATTCGCTAGTAATTgagaaaagtaattaaatgtaatcaattacaTTACGTTACATTTACAAGGCAACTTGCAATTCATAACCTATTACATTTCCCAACACtgattatagtttttatatgatatttttattcttatatgttatattatgtcacattatatattttaaaagagctTATGCTTCTGTTAAAATTAAAGCTTGGGAATGTTTAATCCTGTGATCTCTGGCAACCCTGGACAAAGTTCTCCCAGCTGACGAATCAGTTACGACGATAAAGGCtgcctcatgaatattaatgagattGTGTCCTCTGACTTTGTGGGCGCTTTTAAATTGCTGGGCAATCAAAACGATCCACACCTAGCCCCACCCCCACACCTACGTCACAACGACGCCAGCCAATCAGGGGACACGGTCTAAAAACGCCTCGATCTGGTAACTCCTATTTACTTTTCTGCAGAGACATCCCCTGCGTCCCAAAGCTCCGCCCTAAACAGCATTGAAAATATCacatatactataatataattatatcacATATGATTTAGAATGGATGGTATTCACAAGTTGCGTGTCTGTTCACTCCAGGAAGTCTCtagcatcatttttttaatattcacgAGCCAAAGTTTTTGCACTGATTGACTCGAAGTGGGCGGGGTTATCTGGCGGAGAGGCGTGGCCGTGGTAAAGTTGCCTGACCGGATCAGAGTTTAACGCGATTATTCGGAGGATGCGATGGCAGAGATGGCCGATCTCTCCGTCTCCCTGTCCGTCCTGCTGGGGATTGTAGTTCTTAGCGAAGCGGCGAGGAGAACGGCTTCGCATCTATTCCCAAAACGAAAGTGGACCGTCTACGCGCAGGAGCTGATCTCCACGTTTCAGCTGTGCGCATGCACGCACGAGTTAAAGCTGCTCGCGGATGTGGGCGGACTGGAGCCGCGGGTCGCGCTGACGCTCACGTTCCTCGTCTCGGTGGTCCACGGACTTTCATTCCGCGGCGCGATCTGCAACCCGACCGGCGCTCTGGAGCAGCTCTGCCTCGGGACTCTGACGCGGCGATGCGCGCTGACGCGGATCTCGTGCCAGCTGATCGCGGCGGAGGTGGCGCGGCGCGTCATGCCGCGCGCTTGGGCGCTGACGCTCTCTGACCTGCACGCGCGGCACTCGCGGACGGGCTTTGCGTGCACGACCAGCCCCGTTAACGCGCCTCTGCCGCAGGCCGCCGCGGTGGAGCTGGGCTGCGCGTTTGTGATGCACACGGCGGCGTTTAACGTGGAGAAGGTGGAGGAGAAATATCGCGTTCCTGCGATAGCTGCTGTCATCACTGTACTAGTCTATGCAGGCGGTCATCTCACTGGTGCTGTGTTTAACCCGGCCCTGGCGTTCTCCATACAGTTCTCCTGTCCCGGGAACAGCGTGCTGGACTACATCGTAGTGTACTGGATCGGACCAATACTGGGCATGACAGGCGCTCTGCTGCTCTTTGACAAGCTGATCCCCGCCGTTTCAGGGAAAAACGCAACTCCGGGGCGCCTGAACTCCAACGGACTCGGGACTAAAAAGATGAAGTGAATTACATACTGTGAACATACACTGTCATTCTCCAAGCAATAACCAGTTTCTGCAGGTTTTAAAAGGTCTTAATTTGTCCCTCTCTAGGCCTAAAAAGGTCTTAAATCAGAGCAAGAACGTCTTAAGTGCGTGACGTGAATGAACATCTTcctctgtattttaaaaacacatatttaaacGCCCTTAAATCAGGATATACTTACTTAAGATGCAAATTCTCGGTTTCTGAGAAACCGCAGAAAAATCTGTTAACGGGGCGTGAAAACTTTTCCGTTTGAATTAAGTCGATTTTTCTAGATAATCGTAAACTCACTTATTTGGATCAACTTCTCAGAAACTGATATGCAGCTATCTGGCTTATCAAAGTGCATTCATTTGCACTAACAAGTCCATACCGAACCATTCCTTCATTAGTTTAGTCTTAAACGTGTCTTcataaaacctgcagaaactCTGAACGACGAAACTGAAGGGCCATttatgtcgttttttttttttttaggaggtTTTCGGTGAAatcttaaatgtcttttttttatttatttttttaaataagaacgTGCACGATTCATCTGTAAAGACGGACATAAAGCTGCAGCAACATTCATAAAAAGCACAAGAATCAACTggaaattcaactttttttataagttaaatcacattttaacattCCTGTAATAAGAGACCTGAAGTGTTCGAATACTACTTGGTGTTACGTTCTACTAGCGATGGTTCTTATCTAGTGATAGGTAGATGTTATAATAGTACTAGTAATCTTAAGCACAGTTTTGCAGTGCCTTTGGATAATTCTGGGTAAAATAACCTGGAAAGACCAGACTGGATTGAATGCAGCGAATGCagaatgtattataatatgGGATAAAAACACACTCACGTATGAGGAATCGAACAAAGCAGTGTGCTTGTAAATAAACTTTACATAAAAAGCA

Function

GO:

id name namespace
GO:0006810 transport biological_process
GO:0016020 membrane cellular_component
GO:0005215 transporter activity molecular_function

KEGG:

id description
K09870 AQP11; aquaporin-11

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU188173 lncRNA upstream 1530 18491997 ~ 18518461 (+) True G127434
TU188170 lncRNA upstream 32720 18485857 ~ 18487271 (+) True G127431
TU188151 lncRNA upstream 167888 18351740 ~ 18352103 (+) True G127413
TU187939 lncRNA upstream 538650 17977675 ~ 17981341 (+) True G127268
TU187928 lncRNA upstream 545489 17972550 ~ 17974502 (+) True G127263
TU188185 lncRNA downstream 3565 18527129 ~ 18528132 (+) True G127443
TU188186 lncRNA downstream 3565 18527129 ~ 18528342 (+) False G127443
TU188209 lncRNA downstream 36399 18559963 ~ 18563152 (+) True G127456
TU188216 lncRNA downstream 50255 18573819 ~ 18574354 (+) True G127460
TU188242 lncRNA downstream 122992 18646556 ~ 18646836 (+) False LOC122323076
XM_043264031.1 mRNA upstream 59182 18393603 ~ 18460809 (+) True hcn4
XM_043264106.1 mRNA upstream 133061 18339199 ~ 18386930 (+) True LOC122362573
XM_043264108.1 mRNA upstream 133061 18339200 ~ 18386930 (+) False LOC122362573
XM_043264105.1 mRNA upstream 133061 18348667 ~ 18386930 (+) False LOC122362573
XM_043264104.1 mRNA upstream 176134 18339143 ~ 18343857 (+) True ugt5f1
XM_043264715.1 mRNA downstream 20799 18544363 ~ 18546307 (+) True aamdc
XM_043216726.1 mRNA downstream 122798 18646362 ~ 18652164 (+) True LOC122323076
XM_043216727.1 mRNA downstream 125008 18648572 ~ 18652164 (+) False LOC122323076
XM_043216730.1 mRNA downstream 131054 18654618 ~ 18658740 (+) False LOC122323077
XM_043216729.1 mRNA downstream 131055 18654619 ~ 18658740 (+) True LOC122323077
TU187968 other upstream 379738 18138535 ~ 18140253 (+) True G127292
TU187918 other upstream 591826 17922928 ~ 17928165 (+) True G127258
TU187919 other upstream 591826 17926100 ~ 17928165 (+) False G127258
XR_006253166.1 other upstream 632780 17883665 ~ 17887211 (+) True sdr42e1
TU187881 other upstream 707824 17808674 ~ 17812167 (+) False G127239
TU188207 other downstream 36802 18560366 ~ 18561610 (+) False G127456
TU188208 other downstream 36802 18560366 ~ 18561610 (+) False G127456
TU188266 other downstream 254204 18777768 ~ 18841535 (+) False G127500
TU188268 other downstream 254204 18777768 ~ 18782159 (+) True G127500
XR_006246956.1 other downstream 1479440 20003004 ~ 20013786 (+) False wdr59

Expression Profile