Gene
RNA
| Item | Value |
|---|---|
| RNA id | XM_043264158.1 |
| length | 893 |
| RNA type | mRNA |
| GC content | 0.42 |
| exon number | 6 |
| gene id | si:ch211-218c6.8 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_056716.1 |
| NCBI id | CM032085.1 |
| chromosome length | 26409628 |
| location | 25107115 ~ 25108935 (+) |
| genome version | ASM1883169v1_2021_tiger_barb_Genome |
| species | tiger barb (Puntius tetrazona) |
| id | name | namespace |
|---|---|---|
| GO:0030163 | protein catabolic process | biological_process |
| GO:1901565 | organonitrogen compound catabolic process | biological_process |
| GO:0009057 | macromolecule catabolic process | biological_process |
| GO:1901575 | organic substance catabolic process | biological_process |
| GO:0044248 | cellular catabolic process | biological_process |
| GO:0044257 | cellular protein catabolic process | biological_process |
| GO:0044265 | cellular macromolecule catabolic process | biological_process |
| GO:0051603 | proteolysis involved in cellular protein catabolic process | biological_process |
| GO:0008537 | proteasome activator complex | cellular_component |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| XR_006253142.1 | lncRNA | upstream | 57510 | 25034118 ~ 25049605 (+) | False | LOC122362644 |
| TU190635 | lncRNA | upstream | 63295 | 25043088 ~ 25043820 (+) | True | G129134 |
| XR_006253141.1 | lncRNA | upstream | 64931 | 25034118 ~ 25042184 (+) | True | LOC122362644 |
| TU190626 | lncRNA | upstream | 90131 | 25013750 ~ 25016984 (+) | True | G129125 |
| TU190628 | lncRNA | upstream | 106185 | 25000730 ~ 25000930 (+) | True | G129127 |
| TU190813 | lncRNA | downstream | 179208 | 25288143 ~ 25288537 (+) | True | G129246 |
| TU190829 | lncRNA | downstream | 237470 | 25346405 ~ 25347280 (+) | False | mt2 |
| TU190833 | lncRNA | downstream | 239821 | 25348756 ~ 25349038 (+) | True | G129262 |
| TU190852 | lncRNA | downstream | 331113 | 25440048 ~ 25442441 (+) | True | G129270 |
| TU191004 | lncRNA | downstream | 553562 | 25662497 ~ 25663585 (+) | True | G129360 |
| XM_043264256.1 | mRNA | upstream | 3364 | 25099382 ~ 25103751 (+) | True | si:ch211-242e8.1 |
| XM_043264257.1 | mRNA | upstream | 3364 | 25099382 ~ 25103751 (+) | False | si:ch211-242e8.1 |
| XM_043216926.1 | mRNA | upstream | 11442 | 25090195 ~ 25095673 (+) | True | c18h11orf16 |
| XM_043264439.1 | mRNA | upstream | 93495 | 25009287 ~ 25013620 (+) | True | rnf141 |
| XM_043264440.1 | mRNA | upstream | 93495 | 25009340 ~ 25013620 (+) | False | rnf141 |
| XM_043264006.1 | mRNA | downstream | 14386 | 25123321 ~ 25124789 (+) | False | chtf8 |
| XM_043264005.1 | mRNA | downstream | 14392 | 25123327 ~ 25124789 (+) | True | chtf8 |
| XM_043264600.1 | mRNA | downstream | 67997 | 25176932 ~ 25187744 (+) | True | trhr2 |
| XM_043264614.1 | mRNA | downstream | 181067 | 25290002 ~ 25294615 (+) | True | LOC122362888 |
| XM_043264615.1 | mRNA | downstream | 185808 | 25294743 ~ 25309740 (+) | True | kiaa0513 |
| XR_006246977.1 | other | upstream | 111165 | 24995771 ~ 24995950 (+) | True | LOC122323238 |
| TU190455 | other | upstream | 519070 | 24583845 ~ 24588045 (+) | False | LOC122323037 |
| TU190171 | other | upstream | 649555 | 24449765 ~ 24457560 (+) | True | G128858 |
| TU189952 | other | upstream | 1370269 | 23724636 ~ 23736846 (+) | False | cdh13 |
| TU189951 | other | upstream | 1527313 | 23457100 ~ 23579802 (+) | False | cdh13 |
| XR_006253170.1 | other | downstream | 185808 | 25294743 ~ 25308065 (+) | False | kiaa0513 |
| XR_006253171.1 | other | downstream | 185808 | 25294743 ~ 25308065 (+) | False | kiaa0513 |
| TU190830 | other | downstream | 237470 | 25346405 ~ 25348594 (+) | True | mt2 |
| unassigned_transcript_2193 | other | downstream | 788488 | 25897423 ~ 25897505 (+) | True | trnal-cag_32 |
| TU191105 | other | downstream | 812332 | 25921267 ~ 26174156 (+) | True | G129424 |
