RNA id: XM_043264168.1


Basic Information

Item Value
RNA id XM_043264168.1
length 2729
RNA type mRNA
GC content 0.49
exon number 3
gene id kcng4a
representative False

Chromosome Information

Item Value
chromosome id NC_056716.1
NCBI id CM032085.1
chromosome length 26409628
location 23859036 ~ 23892165 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome
species tiger barb
(Puntius tetrazona)

Sequence

atgcattcatgttgtgaaatatggaatattacaatttaaaatgtaaaaaattccATTTGAATATATTGCATTGTATTCCTAtgattaaaagattaattttcagcagcagtTCCTGTCTTTTTGAATgtatcattgctgaataaaagtaatatttatttttaaatcttaatgaccccaaactttgaAACGGTACATACGTCTATATATCATTTCTCTCTTACAGACAGTTTGATGACACCACAGCAGGTTTTATAGCCCTGTTTAAAAACTGTCCTGTCAGGAAGTTAGAGTTATTTAGTACTCTGTAATTACGGACAGAGCAGTGCCTTCAGCAatggcaaacttttttttaataaatacagagAGATGATCATTAAAAACCAGGAGCACTCGCCTCACTTCCTGAAATTAAGCACGGGATGGGCGGCATCTCCTTTCCACTTCCTCTCACCTGTCCCTGACCCTCTTCACAGTGCAGCGTGTAcactgaaaatgcattaaacaaacacaGTGATTTATCACAGGCTGACCTATGGTGACACTCAGGATCTCCCACACCTAAGGGGAGATTGATGGGACCACCAACATAAAGCCTGTGAAGTTGTGACCTTTCAGTGTCCTTTCTCtgatttttcctctttctttggTTTTTATTAGCAGTGGGATTTGAAAAGCGTTTGGACTCTCCATTCTACACCAGAACGGTGCTGCGGCAGCTGTTGGTATACTGCTGAAAGATCACAAGTGAATCCAACAGGTGGTCACTTATAACCAACTAAATGTTCAAATGATGTGGGATGTTTGGGTCTTCACTGAACTGTGCATGAGATCCTTTGGGATCTACCTTCGATTAAACACCTCAATGCCCTAAACCCAAGGTATCAGGCTAACAGTAGACTACCTGAACTTCGCGCAACCATTTTGATGAACTTTCTTCTTCAATGCCATCATGCCAATCATCAGCAATGCCAATCATGACTTCAGCAACCTCTCGGTCAGTGACGACAGCAGCTTGGACCACATTTTTACAGAGATTCCGGAAACTGAGACCGTCAAGGGAGTGTATTATCAACGTGCTCAGTTCATTCGCCGACAGGAAGATCTGCTTTCGGTGGACCACGGTCTGCAGGCCCTCATCAATGTGGGGGGCAACCGCTACACCTTTCCTTGGAGTACGTTGGAGCAGTTCCCCCTGACTCGTTTAGGACGTCTCAAACCCTGCAGCAGTCCCGAAGAGATCGCTTGTGTTTGTGACGATTACGATGAGACACGCCATGAATTTTTCTTTGACCGTAGCCCCAGTGCGTTCCGTGTAATCCTTAACTTCCTGGCAGCAGGAAAGCTACGGTTGTTACGGGAGATGTGTGCTCTTTCACTGCATGAGGAGCTCAACTATTGGGGTGTAGAGATGGCCTACATGGAACGCTGCTGCAAGCGCAAGATGTACACCCGCATTGAGGAGGTTGCCGAGCTTGAGCGGCGCGAGGAGGAACGGCGTCAACACAGAATGCAGCTACGCCCTCCTGCCGTGGAGACACGTTACCGAAAGATCATGAATCATTTGAGGGACATGGTGGAGAACCCTCAGTCGGGTTTGCCGGGAAAGTTGTTTGCCTGTTTGTCCGTGTTGATGGTGGCAGTGACAGTGATCAGCCTGTGCATCAGCACCATGCCGGACCTCAGAGAGGAGGAGAGTAGGGGTGTGTGCTCCCAGAAATGCTACAACATGTTCATCGTCGAGACGGTTTGTGTGGCCTGGTTCTCCCTGGAGTTTCTGCTTAGGTTCATGCAGGCACGCAGCAAGCTGGTGTTTCTCCGTGGACCCTTGAACATCATCGACGCCATGGCCATCCTTCCCTACTACGTGTCTCTAGTAGTGGAAGAGAACCCCAGCAATGAATATGAGCGACCCTCTGGTGGTAAGGGCTACCTGGACAAGCTCGGGCTGGTACTGCGGATTCTGCGGGCCCTGCGGATCCTGTACGTGATGCGGCTGGCCCGTCATTCTCTGGGCTTGCAGACGCTGGGGATGACAGTGCGGCGGAGCACTCGCGAGTTTGGCCTGCTGCTGCTCTTTCTCTGCGTAGCCGTGACGCTCTTTTCGCCTCTGGTGCACCTTGCGGAAAGCGAGCTAACCGGAGTGCAGGATTTCAGCAGCATTCCTGCCTCTTACTGGTGGGCGATCATCTCCATGACTACAGTGGGTTATGGGGATATGGTACCTAGAAGCATACCTGGTCAGGTGGTGGCACTCAGCAGCATTCTGAGTGGGATCCTAATCATGGCCTTCCCGGCCACTTCCATCTTCCACATGTTTTCCCGCTCATACCAAGAGTTGAAACAGGAGCATGACAGGCTCTTTAAAGAGGAGTGTGCGGCAGCTGCCGCAGCTACCGCAGGACCCGATGACGAGCAGGATGGAGGATGGGTGGCCTTTCCTCCTCCTAGACTAGTTCTTACTCCAGACACAGAGACGCCTGGCTCTCTTGAAGACCTTTCTCTTCTCGGGAATTGTGGAGAGACTTCCGGGAATAACAAGCACCCGTTACCAGCTGGAGCCTTTTAAGTTATGCACACGCATTGTACTCTTCTCTAGATGAAACCTGTTCTTCCGTGCCCTCATAATGAACCCTCTTGCAGTGGACAGGGTGACGTTAAAGGGCCTTGAAGTTATTTTGTCTTCCAACAGCCACAAGCTGATCATTAAAGTACTAATTCCTTCATACTCA

Function

GO:

id name namespace
GO:0071805 potassium ion transmembrane transport biological_process
GO:0034765 regulation of ion transmembrane transport biological_process
GO:0051260 protein homooligomerization biological_process
GO:0008076 voltage-gated potassium channel complex cellular_component
GO:0005251 delayed rectifier potassium channel activity molecular_function

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU189981 lncRNA upstream 76273 23785024 ~ 23787163 (+) True G128725
TU189935 lncRNA upstream 503879 23358451 ~ 23359557 (+) True G128699
TU189930 lncRNA upstream 526347 23335791 ~ 23337089 (+) True G128696
TU189624 lncRNA upstream 783126 23068310 ~ 23080310 (+) True G128476
TU189621 lncRNA upstream 796368 23066812 ~ 23067068 (+) True G128475
TU190019 lncRNA downstream 136324 24028489 ~ 24029817 (+) True G128753
TU190041 lncRNA downstream 164555 24056720 ~ 24063271 (+) True G128770
TU190043 lncRNA downstream 166188 24058353 ~ 24066103 (+) True G128772
TU190086 lncRNA downstream 404944 24297109 ~ 24297333 (+) True G128803
TU190087 lncRNA downstream 405444 24297609 ~ 24297845 (+) True G128804
XM_043264172.1 mRNA upstream 10161 23818053 ~ 23853275 (+) False si:dkey-246g23.2
XM_043264171.1 mRNA downstream 7761 23899926 ~ 23911982 (+) False si:dkey-246g23.4
XM_043264170.1 mRNA downstream 11486 23903651 ~ 23911982 (+) True si:dkey-246g23.4
XM_043264259.1 mRNA downstream 23764 23915929 ~ 23927588 (+) False wfdc1
XM_043264258.1 mRNA downstream 23766 23915931 ~ 23927588 (+) True wfdc1
XM_043216813.1 mRNA downstream 36125 23928290 ~ 23936310 (+) True utp4
TU189952 other upstream 126590 23724636 ~ 23736846 (+) False cdh13
TU189951 other upstream 283634 23457100 ~ 23579802 (+) False cdh13
TU189495 other upstream 1424757 22434806 ~ 22438679 (+) True G128367
TU189467 other upstream 1456454 22400974 ~ 22406982 (+) True LOC122363143
XR_006246928.1 other upstream 3306809 20551148 ~ 20556627 (+) False si:dkey-30c15.17
TU190171 other downstream 557600 24449765 ~ 24457560 (+) True G128858
TU190455 other downstream 691680 24583845 ~ 24588045 (+) False LOC122323037
XR_006246977.1 other downstream 1103606 24995771 ~ 24995950 (+) True LOC122323238
XR_006253170.1 other downstream 1402578 25294743 ~ 25308065 (+) False kiaa0513
XR_006253171.1 other downstream 1402578 25294743 ~ 25308065 (+) False kiaa0513

Expression Profile